[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 81 items for (author: seifer & s)

EMDB-71706:
Alpha1/Beta Heteromeric Glycine receptor in the presence of 0.200 mM strychnine and 500 nM ivermectin
Method: single particle / : Gibbs E, Chakrapani S

EMDB-55810:
Deconvolved piDPC tomogram of lift-out lamellae from cell-derived matrices
Method: electron tomography / : Kirchweger P, Seifer S, Wolf SG, Zens B, Schur FKM, Elbaum M

EMDB-55811:
Deconvolved piDPC tomogram of lift-out lamellae from cell-derived matrices
Method: electron tomography / : Kirchweger P, Seifer S, Wolf SG, Zens B, Schur FKM, Elbaum M

EMDB-55812:
Deconvolved piDPC tomogram of lift-out lamellae from cell-derived matrices recorded on the Opal detector
Method: electron tomography / : Kirchweger P, Seifer S, Wolf SG, Zens B, Schur FKM, Elbaum M

EMDB-52895:
Cryo-EM structure of E. coli complex I variant V96P/N142M (NuoE)
Method: single particle / : Seifermann T, Wohlwend D, Friedrich T

EMDB-52969:
Cryo-EM Map of the membrane arm of respiratory complex I V96P/N142M (nuoE) used for the creation of a composite map
Method: single particle / : Seifermann T, Wohlwend D, Friedrich T

EMDB-52970:
Cryo-EM consensus map of E. coli complex I V96P/N142M (NuoE)
Method: single particle / : Seifermann T, Wohlwend D, Friedrich T

EMDB-52971:
focused map of the peripheral arm of E. coli complex I variant V96P/N142M (NuoE)
Method: single particle / : Seifermann T, Wohlwend D, Friedrich T

EMDB-52973:
focused map of the junction between peripheral arm and membrane arm of E. coli respiratory complex I variant V96P/N142M (NuoE)
Method: single particle / : Seifermann T, Wohlwend D, Friedrich T

PDB-9q8i:
Cryo-EM structure of E. coli complex I variant V96P/N142M (NuoE)
Method: single particle / : Seifermann T, Wohlwend D, Friedrich T

EMDB-51228:
yeast TFIIIC TauB subcomplex bound to a tRNA gene
Method: single particle / : Seifert-Davila W, Girbig M, Hauptmann L, Hoffmann T, Eustermann S, Mueller C, Chaban A, Duss O, Baudin F

EMDB-51231:
yeast TFIIIC TauA subcomplex bound to a tRNA gene
Method: single particle / : Seifert-Davila W, Girbig M, Hauptmann L, Hoffmann T, Eustermann S, Mueller C, Chaban A, Duss O, Baudin F

PDB-9gc3:
yeast TFIIIC TauB subcomplex bound to a tRNA gene
Method: single particle / : Seifert-Davila W, Girbig M, Hauptmann L, Hoffmann T, Eustermann S, Mueller C, Chaban A, Duss O, Baudin F

PDB-9gck:
yeast TFIIIC TauA subcomplex bound to a tRNA gene
Method: single particle / : Seifert-Davila W, Girbig M, Hauptmann L, Hoffmann T, Eustermann S, Mueller C, Chaban A, Duss O, Baudin F

EMDB-44899:
Homomeric alpha3 glycine receptor in the presence of 1 mM glycine at pH 6.4 in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44900:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44933:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine in an apo state.
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44934:
Homomeric alpha3 glycine receptor in the presence of 1 mM glycine in an desensitized state.
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44963:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44964:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in an apo state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44970:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in an intermediate state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44974:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-44976:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in an apo state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-45073:
Homomeric alpha3 glycine receptor in the presence of 0.1 millimolar glycine and 1 micromolar zinc in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bu2:
Homomeric alpha3 glycine receptor in the presence of 1 mM glycine at pH 6.4 in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bu3:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bvh:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine in an apo state.
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bvj:
Homomeric alpha3 glycine receptor in the presence of 1 mM glycine in an desensitized state.
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bwb:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bwc:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in an apo state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bwe:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in an intermediate state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bwg:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bwj:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in an apo state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

PDB-9bzp:
Homomeric alpha3 glycine receptor in the presence of 0.1 millimolar glycine and 1 micromolar zinc in a desensitized state
Method: single particle / : Kindig K, Gibbs E, Chakrapani S

EMDB-19762:
4D_STEM cryo tomogram of t4 Phages produced by PCA2
Method: electron tomography / : Seifer S, Kirchweger P, Edel KM, Elbaum M

EMDB-19764:
4D_STEM cryo tomogram of t4 Phages produced by PCA3
Method: electron tomography / : Seifer S, Kirchweger P, Edel KM, Elbaum M

EMDB-19765:
4D STEM cryo tomogram of t4 Phages produced by iCOM
Method: electron tomography / : Seifer S, Kirchweger P, Edel KM, Elbaum M

EMDB-35163:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 5.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-35164:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in closed state
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-36339:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 2.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-37446:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in intermediate state
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-37447:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8i47:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 5.5
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8i48:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in closed state
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8jj3:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 2.5
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8wcq:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in intermediate state
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8wcr:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-35161:
Cryo-EM structure of nanodisc (asolectin) reconstituted GLIC at pH 7.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-35162:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 7.5
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8i41:
Cryo-EM structure of nanodisc (asolectin) reconstituted GLIC at pH 7.5
Method: single particle / : Bharambe N, Li Z, Basak S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more