[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 66 items for (author: roos & n)

EMDB-50546:
Cryo-EM structure of Influenza B/Washington/02/2019 virus hemagglutinin in complex with single-domain antibody hVHH-69.
Method: single particle / : Felix J, Matthys A, Savvides SN, Saelens X

EMDB-50547:
Cryo-EM structure of Influenza B/Washington/02/2019 virus neuraminidase in complex with single-domain antibody hVHH-525.
Method: single particle / : Felix J, Matthys A, Savvides SN, Saelens X

EMDB-18968:
Cryo-EM structure of a coxsackievirus A6 virus-like particle
Method: single particle / : Giannopoulou EA, Jakobi AJ

PDB-8r6x:
Cryo-EM structure of a coxsackievirus A6 virus-like particle
Method: single particle / : Giannopoulou EA, Jakobi AJ

EMDB-43288:
SpoIVFB:pro-sigmaK complex
Method: single particle / : Orlando MA, Pouillon HJT, Mandal S, Kroos L, Orlando BJ

EMDB-43289:
SpoIVFB(E44Q variant):pro-sigmaK complex
Method: single particle / : Orlando MA, Pouillon HJT, Mandal S, Kroos L, Orlando BJ

PDB-8vjl:
SpoIVFB:pro-sigmaK complex
Method: single particle / : Orlando MA, Pouillon HJT, Mandal S, Kroos L, Orlando BJ

PDB-8vjm:
SpoIVFB(E44Q variant):pro-sigmaK complex
Method: single particle / : Orlando MA, Pouillon HJT, Mandal S, Kroos L, Orlando BJ

EMDB-17331:
Human Cohesin ATPase module
Method: single particle / : Landwerlin P, Durand A, Diebold-Durand ML, Romier C

EMDB-17820:
Human Cohesin ATPase module with an open DNA exit gate
Method: single particle / : Landwerlin P, Durand A, Diebold-Durand ML, Romier C

PDB-8p0a:
Human Cohesin ATPase module
Method: single particle / : Landwerlin P, Durand A, Diebold-Durand ML, Romier C

PDB-8pq5:
Human Cohesin ATPase module with an open DNA exit gate
Method: single particle / : Landwerlin P, Durand A, Diebold-Durand ML, Romier C

EMDB-18560:
SARS-CoV-2 S protein bound to human neutralising antibody UZGENT_G5
Method: single particle / : Remaut H, Reiter D, Vandenkerckhove L, Acar DD, Witkowski W, Gerlo S

EMDB-18571:
SARS-CoV-2 S protein bound to neutralising antibody UZGENT_A3
Method: single particle / : Remaut H, Reiter D, Vandenkerckhove L, Acar DD, Witkowski W, Gerlo S

PDB-8qpr:
SARS-CoV-2 S protein bound to human neutralising antibody UZGENT_G5
Method: single particle / : Remaut H, Reiter D, Vandenkerckhove L, Acar DD, Witkowski W, Gerlo S

PDB-8qq0:
SARS-CoV-2 S protein bound to neutralising antibody UZGENT_A3
Method: single particle / : Remaut H, Reiter D, Vandenkerckhove L, Acar DD, Witkowski W, Gerlo S

EMDB-14878:
CtMre11-Rad50-Nbs1 complex, long coiled-coils map
Method: single particle / : Rotheneder M, Stakyte K, Bartho JD, Lammens K, Hopfner KP

EMDB-14630:
Membrane-bound CHMP2A-CHMP3 filament (430 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

EMDB-14631:
Membrane-bound CHMP2A-CHMP3 filament (410 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

PDB-7zcg:
CHMP2A-CHMP3 heterodimer (430 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

PDB-7zch:
CHMP2A-CHMP3 heterodimer (410 Angstrom diameter)
Method: helical / : Azad K, Desfosses A, Effantin G, Schoehn G, Weissenhorn W

EMDB-14879:
Mre11-Rad50-Nbs1 complex (Chaetomium thermophilum) lower coiled-coils
Method: single particle / : Stakyte K, Rotheneder M, Bartho JD, Lammens K, Hopfner KP

EMDB-14880:
Eukaryotic Mre11-Rad50-Nbs1 complex catalytic head
Method: single particle / : Stakyte K, Rotheneder M, Bartho JD, Lammens K, Hopfner KP

EMDB-14881:
Chaetomium thermophilum Mre11-Rad50-Nbs1 complex bound to ATPyS (composite structure)
Method: single particle / : Rotheneder M, Stakyte K, Bartho JD, Lammens K, Hopfner KP

EMDB-15948:
Human Mre11-Nbs1 complex
Method: single particle / : Rotheneder M, Stakyte K, Bartho JD, Lammens K, Hopfner KP

PDB-7zr1:
Chaetomium thermophilum Mre11-Rad50-Nbs1 complex bound to ATPyS (composite structure)
Method: single particle / : Bartho JD, Rotheneder M, Stakyte K, Lammens K, Hopfner KP

PDB-8bah:
Human Mre11-Nbs1 complex
Method: single particle / : Bartho JD, Rotheneder M, Stakyte K, Lammens K, Hopfner KP

EMDB-14877:
Chaetomium thermophilum MRN complex (Nbs1)
Method: single particle / : Stakyte K, Rotheneder M, Bartho JD, Lammens K, Hopfner KP

EMDB-14882:
Chaetomium thermophilum Rad50 zinc-hook tetramer
Method: single particle / : Stakyte K, Rotheneder M, Bartho JD, Lammens K, Hopfner KP

EMDB-12526:
An artificial protein cage with unusual geometry scaffolds a regular 3D lattice of gold nanoparticles.
Method: single particle / : Biela AP

EMDB-25161:
13pf E254N microtubule from recombinant human tubulin decorated with EB3
Method: helical / : LaFrance BJ, Greber BJ, Zhang R, McCollum C, Nogales E

EMDB-25156:
Undecorated 13pf wildtype microtubule from recombinant human tubulin
Method: helical / : LaFrance BJ, Greber BJ

EMDB-25157:
13pf wildtype microtubule from recombinant human tubulin decorated with kinesin
Method: helical / : LaFrance BJ, Greber BJ

EMDB-25158:
Undecorated 13pf E254A microtubule from recombinant human tubulin
Method: helical / : LaFrance BJ, Greber BJ, Zhang R, McCollum C, Nogales E

EMDB-25159:
13pf E254A microtubule from recombinant human tubulin decorated with EB3
Method: helical / : LaFrance BJ, Greber BJ

EMDB-25160:
Undecorated 13pf E254N microtubule from recombinant human tubulin
Method: helical / : LaFrance BJ, Greber BJ

PDB-7sj7:
Undecorated 13pf wildtype microtubule from recombinant human tubulin
Method: helical / : LaFrance BJ, Greber BJ, Zhang R, McCollum C, Nogales E

PDB-7sj8:
13pf wildtype microtubule from recombinant human tubulin decorated with kinesin
Method: helical / : LaFrance BJ, Greber BJ, Zhang R, McCollum C, Nogales E

PDB-7sj9:
13pf E254A microtubule from recombinant human tubulin decorated with EB3
Method: helical / : LaFrance BJ, Greber BJ, Zhang R, McCollum C, Nogales E

PDB-7sja:
Undecorated 13pf E254N microtubule from recombinant human tubulin
Method: helical / : LaFrance BJ, Greber BJ, Zhang R, McCollum C, Nogales E

EMDB-21688:
Structure of human TRPA1 in complex with inhibitor GDC-0334
Method: single particle / : Rohou A, Rouge L, Arthur CP

PDB-6wj5:
Structure of human TRPA1 in complex with inhibitor GDC-0334
Method: single particle / : Rohou A, Rouge L, Arthur CP, Volgraf M, Chen H

EMDB-10720:
Cryo-tomography of ESCRT III CHMP4B/CHMP2B filaments bound to liposomes
Method: electron tomography / : Bertin A, de Franceschi N, de la Mora E, Maity S, Miguet N, di Cicco A, Roos W, Mangenot S, Weissenhorn W, Bassereau P

EMDB-10744:
Microtubule Nucleation by Single Human gamma-TuRC in a Partly Open Asymmetric Conformation
Method: single particle / : Locke J, Costa A

EMDB-20708:
B-Raf:14-3-3 complex
Method: single particle / : Kondo Y, Ognjenovic J

PDB-6uan:
B-Raf:14-3-3 complex
Method: single particle / : Kondo Y, Ognjenovic J, Banerjee S, Karandur D, Merk A, Kulhanek K, Wong K, Roose JP, Subramaniam S, Kuriyan J

EMDB-4713:
Negative staining of antibodies cooperative complex formed by human fab7B10 and fab2C1 bound to the N. meningitidis antigen factor H binding protein (fHbp)
Method: single particle / : Peschiera I, Ferlenghi I, Melero R, Liljeroos LJ, Paccagnini E, Giusti F, Carazo JM, Sorzano COS, Scarselli M

EMDB-4714:
Negative staining of antibodies cooperative complex formed by human IgG1 mAb7B10 and mAb2C1 bound to the N. meningitidis antigen factor H binding protein (fHbp)
Method: single particle / : Peschiera I, Ferlenghi I, Melero R, Liljeroos LJ, Paccagnini E, Giusti F, Carazo JM, Sorzano COS, Scarselli M

EMDB-4715:
Negative staining of antibodies cooperative complex formed by human IgG1 mAb1A3 and mAb1A12 bound to the N. meningitidis antigen factor H binding protein (fHbp)
Method: single particle / : Peschiera I, Ferlenghi I, Melero R, Liljeroos LJ, Paccagnini E, Giusti F, Carazo JM, Sorzano COS, Scarselli M

EMDB-9061:
HA-GCN4pL-sfGFP map in negative stain EM
Method: single particle / : Ward AB, Turner HL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more