[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 43 items for (author: ranish & j)

EMDB-45206:
Reconstituted P400 Subcomplex of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-45240:
P400 subcomplex of the native human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-45252:
ARP module of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c57:
Reconstituted P400 Subcomplex of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c62:
P400 subcomplex of the native human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c6n:
ARP module of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-45176:
TRRAP module of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-45180:
Second BAF53a of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c47:
TRRAP module of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c4b:
Second BAF53a of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-22476:
Cryo-EM map of the human BAF base module
Method: single particle / : Suzuki H, Mashtalir N, Kadoch C, Walz T

EMDB-22477:
Cryo-EM map of the human BAF-nucleosome complex refined with a mask for the nucleosome
Method: single particle / : Suzuki H, Mashtalir N, Kadoch C, Walz T

EMDB-22478:
Cryo-EM map of the human BAF-nucleosome complex refined with a mask for the nucleosome and the ATPase-ARP modules
Method: single particle / : Suzuki H, Mashtalir N, Kadoch C, Walz T

EMDB-22479:
Cryo-EM map of the human BAF-nucleosome complex refined with a mask for the nucleosome and the arm module
Method: single particle / : Suzuki H, Mashtalir N, Kadoch C, Walz T

EMDB-21098:
arm lobe (multibody)
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-21102:
RSC body (classified)
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-21103:
RSC body (multibody)
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-21104:
RSC arm (classified)
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-21105:
RSC head (multibody)
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-21106:
RSC body (classified)
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-21107:
RSC core
Method: single particle / : Patel AB, Moore CM

EMDB-21110:
RSC-NCP swiveled
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-21114:
RSC-NCP locked
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

PDB-6v8o:
RSC core
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

PDB-6v92:
RSC-NCP
Method: single particle / : Patel AB, Moore CM, Greber BJ, Nogales E

EMDB-9298:
Human TFIID BC core
Method: single particle / : Patel AB, Louder RK

EMDB-9299:
Human TFIID BC core
Method: single particle / : Patel AB, Louder RK

EMDB-9300:
Human TFIID BC core
Method: single particle / : Patel AB, Louder RK

EMDB-9301:
Human TFIID BC core
Method: single particle / : Patel AB, Louder RK

EMDB-9302:
Human TFIID Lobe A canonical
Method: single particle / : Patel AB, Louder RK

EMDB-9305:
Human TFIID canonical state
Method: single particle / : Patel AB, Louder RK

EMDB-9306:
Human TFIID bound to promoter DNA and TFIIA
Method: single particle / : Patel AB, Louder RK

PDB-6mzc:
Human TFIID BC core
Method: single particle / : Patel AB, Louder RK, Greber BJ, Grunberg S, Luo J, Fang J, Liu Y, Ranish J, Hahn S, Nogales E

PDB-6mzd:
Human TFIID Lobe A canonical
Method: single particle / : Patel AB, Louder RK, Greber BJ, Grunberg S, Luo J, Fang J, Liu Y, Ranish J, Hahn S, Nogales E

PDB-6mzl:
Human TFIID canonical state
Method: single particle / : Patel AB, Louder RK, Greber BJ, Grunberg S, Luo J, Fang J, Liu Y, Ranish J, Hahn S, Nogales E

PDB-6mzm:
Human TFIID bound to promoter DNA and TFIIA
Method: single particle / : Patel AB, Louder RK, Greber BJ, Grunberg S, Luo J, Fang J, Liu Y, Ranish J, Hahn S, Nogales E

EMDB-0249:
Structure of K. phaffii TFIID
Method: single particle / : Kolesnikova O, Ben-Shem A, Luo J, Ranish J, Schultz P, Papai G

EMDB-0250:
Taf1 lobe of kpTFIID
Method: single particle / : Kolesnikova O, Ben-Shem A, Luo J, Ranish J, Schultz P, Papai G

EMDB-0251:
Molecular structure of promoter-bound yeast TFIID
Method: single particle / : Kolesnikova O, Ben-Shem A, Luo J, Ranish J, Schultz P, Papai G

EMDB-0253:
Molecular structure of promoter-bound yeast TFIID (locally-refined Taf2 lobe)
Method: single particle / : Kolesnikova O, Ben-Shem A, Luo J, Ranish J, Schultz P, Papai G

EMDB-0254:
Molecular structure of promoter-bound yeast TFIID (locally-refined Taf2 lobe with two Taf6 HEAT repeats)
Method: single particle / : Kolesnikova O, Ben-Shem A, Luo J, Ranish J, Schultz P, Papai G

EMDB-0255:
Molecular structure of promoter-bound yeast TFIID (locally-refined Twin lobe)
Method: single particle / : Kolesnikova O, Ben-Shem A, Luo J, Ranish J, Schultz P, Papai G

PDB-6hqa:
Molecular structure of promoter-bound yeast TFIID
Method: single particle / : Kolesnikova O, Ben-Shem A, Luo J, Ranish J, Schultz P, Papai G

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more