[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,408 items for (author: qin & a)

EMDB-64581:
SARS-CoV2 Spike protein with Fab fragment antibody KXD355,state1
Method: single particle / : Wang H

EMDB-64582:
SARS-CoV2 Spike protein with Fab fragment antibody KXD355,state2
Method: single particle / : Wang H

PDB-9uxd:
SARS-CoV2 Spike protein with Fab fragment antibody KXD355,state1
Method: single particle / : Wang H

PDB-9uxe:
SARS-CoV2 Spike protein with Fab fragment antibody KXD355,state2
Method: single particle / : Wang H

EMDB-62606:
Cas12a-PCPS-dark
Method: single particle / : Zhang MF

EMDB-62607:
Cas12a-PCPS-light
Method: single particle / : Zhang MF

PDB-9kwb:
Cas12a-PCPS-dark
Method: single particle / : Zhang MF

PDB-9kwc:
Cas12a-PCPS-light
Method: single particle / : Zhang MF

EMDB-62577:
Cryo-EM structure of HsClpP bound to CLPP-2068
Method: single particle / : Zhao H, Yuan Q, Yin W

PDB-9kuf:
Cryo-EM structure of HsClpP bound to CLPP-2068
Method: single particle / : Zhao H, Yuan Q, Yin W

EMDB-70985:
CryoEM structure of FlaA filament from Shewanella oneidensis
Method: single particle / : Qing L, Fan HC, Liu Y, Miller JF, Huang Y, Zhou ZH

EMDB-70986:
CryoEM structure of FlaB filament from Shewanella oneidensis
Method: single particle / : Qing L, Fan HC, Liu Y, Miller JF, Huang Y, Zhou ZH

PDB-9oxj:
CryoEM structure of FlaA filament from Shewanella oneidensis
Method: single particle / : Qing L, Fan HC, Liu Y, Miller JF, Huang Y, Zhou ZH

PDB-9oxk:
CryoEM structure of FlaB filament from Shewanella oneidensis
Method: single particle / : Qing L, Fan HC, Liu Y, Miller JF, Huang Y, Zhou ZH

EMDB-62145:
SARS-CoV-2 related bat coronavirus BANAL-103 spike in the closed state
Method: single particle / : Qingqing L, Xiao C, Xiaoning L, Yibing Z, Ru L, Zirui K, Didi W, Jiaxu W, Lili L, Junxia Y, Jianxiang S, Shuiling J, Ying P, Na Z, Yushun W, Jian S

PDB-9k75:
SARS-CoV-2 related bat coronavirus BANAL-103 spike in the closed state
Method: single particle / : Qingqing L, Xiao C, Xiaoning L, Yibing Z, Ru L, Zirui K, Didi W, Jiaxu W, Lili L, Junxia Y, Jianxiang S, Shuiling J, Ying P, Na Z, Yushun W, Jian S

EMDB-62224:
The structure of B19V NS1_2-570/AMPPNP
Method: single particle / : Gan J, Zhang Y

EMDB-62225:
The structure of B19V NS1_2-570/ssDNA/AMPPNP
Method: single particle / : Gan J, Zhang Y

EMDB-62226:
The structure of B19V NS1_2-570/dsDNA/AMPPNP
Method: single particle / : Gan J, Zhang Y

EMDB-62227:
The structure of B19V NS1_200-501/AMPPNP
Method: single particle / : Gan J, Zhang Y

PDB-9kbg:
The structure of B19V NS1_2-570/AMPPNP
Method: single particle / : Gan J, Zhang Y

PDB-9kbh:
The structure of B19V NS1_2-570/ssDNA/AMPPNP
Method: single particle / : Gan J, Zhang Y

PDB-9kbi:
The structure of B19V NS1_2-570/dsDNA/AMPPNP
Method: single particle / : Gan J, Zhang Y

PDB-9kbj:
The structure of B19V NS1_200-501/AMPPNP
Method: single particle / : Gan J, Zhang Y

EMDB-45636:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-45637:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjy:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjz:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-50201:
Human condensin II - M18BP1 complex
Method: single particle / : Borsellini A, Vannini A

PDB-9f5w:
Human condensin II - M18BP1 complex
Method: single particle / : Borsellini A, Vannini A

EMDB-47000:
Rhesus RHA10.01 Fab in complex with HIV-1 Env BG505 DS-SOSIP trimer
Method: single particle / : Gorman J, Kwong PD

PDB-9dmb:
Rhesus RHA10.01 Fab in complex with HIV-1 Env BG505 DS-SOSIP trimer
Method: single particle / : Gorman J, Kwong PD

EMDB-61724:
Cryo-EM structure of BTN2A1 in complex with antagonist antibody TH002
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61732:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 in complex with agonist antibody TH001
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61733:
Extracellular region of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61734:
TM/JM/B30.2 regions of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61735:
Raw consensus map of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61736:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61737:
Extracellular region of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61738:
TM/JM/B30.2 regions of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61739:
Raw consensus map of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61740:
Cryo-EM structure of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jq6:
Cryo-EM structure of BTN2A1 in complex with antagonist antibody TH002
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jqp:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 in complex with agonist antibody TH001
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jqq:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jqr:
Cryo-EM structure of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61620:
Cryo-EM structure of human SLFN14
Method: single particle / : Luo M, Jia XD, Wang ZW, Yang JY, Zhang QF, Gao S

PDB-9jn9:
Cryo-EM structure of human SLFN14
Method: single particle / : Luo M, Jia XD, Wang ZW, Yang JY, Zhang QF, Gao S

EMDB-48798:
PP2A-B55 Holoenzyme with Eya3
Method: single particle / : Shi S, Alderman C, Huang W, Zhao R

EMDB-48799:
PP2A-B55 Holoenzyme with B55i
Method: single particle / : Shi S, Alderman C, Huang W, Zhao R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more