[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,393 items for (author: pan & q)

EMDB-72372:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-trimer map 4)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72373:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 1)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72374:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 2)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72375:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 3)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-60812:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60813:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60815:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60817:
Cryo-EM Structure of rRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60819:
Cryo-EM Structure of CRISPR
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-66729:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

EMDB-66731:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

PDB-9irf:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9irg:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9iri:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9xcf:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

PDB-9xcg:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

EMDB-65801:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1.5 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65802:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65803:
Immune complex of P5-1C8 Fab binding the RBD of Omicron JN.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65804:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (2 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65805:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (1 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65806:
Immune complex of P5-1C8 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65807:
Immune complex of P5-1C8 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65808:
Immune complex of P5-1C8 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-63979:
RABV G binding with CTB011 Fab and CTB012 Fab
Method: single particle / : Cao L, Zhang C

PDB-9ua5:
RABV G binding with CTB011 Fab and CTB012 Fab
Method: single particle / : Cao L, Zhang C

PDB-9qcd:
Micro-ED structure of the NSH2-CSH2 tandem domain of SHP2 in complex with the bis-phosphorylated pY627-pY659-Gab1 (613-694) peptide
Method: electron crystallography / : Machner L, Shaikhqasem A, Hamdi F, Breithaupt C, Parthier C, Kyrilis FL, Kastritis PL, Feller SM, Stubbs MT

EMDB-61501:
Cryo-EM Structure of the apo HCAR3-Gi complex
Method: single particle / : Fang Y

EMDB-61502:
Cryo-EM Structure of the niacin-HCAR3-Gi complex
Method: single particle / : Fang Y

PDB-9jic:
Cryo-EM Structure of the apo HCAR3-Gi complex
Method: single particle / : Fang Y, Fang Y

PDB-9jid:
Cryo-EM Structure of the niacin-HCAR3-Gi complex
Method: single particle / : Fang Y, Fang Y

EMDB-63104:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

EMDB-63106:
Cryo-EM structure of GPR155 contracted dimer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Han P

EMDB-63107:
Cryo-EM map of GPR155 extended dimer
Method: single particle / : Gao F, Zhang X, Li D, Han P

PDB-9lhq:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

PDB-9lhv:
Cryo-EM structure of GPR155 contracted dimer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Han P

PDB-9lhx:
Rigid fitting model of GPR155 extended dimer
Method: single particle / : Gao F, Zhang X, Li D, Han P

EMDB-63854:
Cryo-EM map of MSMEG_3496 in complex with AcpM, size exclusion chromatography peak1
Method: single particle / : Gao F, Zhang X, Li D, Ma X

EMDB-63856:
Cryo-EM map of MSMEG_3496 in complex with AcpM, size exclusion chromatography peak2
Method: single particle / : Gao F, Zhang X, Li D, Ma X

EMDB-63860:
Cryo-EM structure of Mycobacterium tuberculosis MmpL5 in complex with AcpM
Method: single particle / : Gao F, Zhang X, Li D, Ma X

PDB-9u4t:
Cryo-EM map of MSMEG_3496 in complex with AcpM, size exclusion chromatography peak1
Method: single particle / : Gao F, Zhang X, Li D, Ma X

PDB-9u4v:
Cryo-EM map of MSMEG_3496 in complex with AcpM, size exclusion chromatography peak2
Method: single particle / : Gao F, Zhang X, Li D, Ma X

PDB-9u51:
Cryo-EM structure of Mycobacterium tuberculosis MmpL5 in complex with AcpM
Method: single particle / : Gao F, Zhang X, Li D, Ma X

EMDB-62276:
Cryo-EM structure of LIPID-mediated dimer of human norepinephrine transporter NET in the presence of Vanoxerine in an inward-open state at resolution of 2.52 angstrom
Method: single particle / : Zhang H, Xu EH, Jiang Y

EMDB-62281:
Cryo-EM structure of LIPID-mediated human norepinephrine transporter NET in the presence of Levomilnacipran in an inward-open state at resolution of 2.46 angstrom.
Method: single particle / : Zhang H, Jiang Y, Xu EH

EMDB-62289:
Cryo-EM structure of lipid-mediated dimer of human norepinephrine transporter NET in the presence of the F3288-0031 in an inward-open state at resolution of 3.1 angstrom
Method: single particle / : Zhang H, Zhang TW, Xu EH, Jiang Y

PDB-9kdh:
Cryo-EM structure of LIPID-mediated dimer of human norepinephrine transporter NET in the presence of Vanoxerine in an inward-open state at resolution of 2.52 angstrom
Method: single particle / : Zhang H, Xu EH, Jiang Y

PDB-9kdm:
Cryo-EM structure of LIPID-mediated human norepinephrine transporter NET in the presence of Levomilnacipran in an inward-open state at resolution of 2.46 angstrom.
Method: single particle / : Zhang H, Jiang Y, Xu EH

PDB-9ke3:
Cryo-EM structure of lipid-mediated dimer of human norepinephrine transporter NET in the presence of the F3288-0031 in an inward-open state at resolution of 3.1 angstrom
Method: single particle / : Zhang H, Zhang TW, Xu EH, Jiang Y

EMDB-60393:
Cryo-EM structure of AbCapV filemant bound with 3',3'-cGAMP with extra phospholipid density
Method: single particle / : Kong JP, Li ZX, Ke SY, Xiao YB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more