[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,093 items for (author: owa & m)

EMDB-75389:
E.coli 50S ribosomal subunit bound to compound 48a
Method: single particle / : Raskar T, Lee I

PDB-10qm:
E.coli 50S ribosomal subunit bound to compound 48a
Method: single particle / : Raskar T, Lee I

EMDB-72125:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-72280:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-74405:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q1e:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q6o:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9zlk:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-54549:
Ternary complex structure of compound 1 bound to SMARCA2 bromodomain and DCAF16:DDB1deltaBPB
Method: single particle / : Spiteri VA, Nakasone MA, Casement R, Iso K, Cowan AD, Ciulli A

PDB-9s3r:
Ternary complex structure of compound 1 bound to SMARCA2 bromodomain and DCAF16:DDB1deltaBPB
Method: single particle / : Spiteri VA, Nakasone MA, Casement R, Iso K, Cowan AD, Ciulli A

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-48534:
Cryo-EM of MgtA in the E2-P state with bound Mg2+ at 3.1 angstrom resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9mqm:
Cryo-EM of MgtA in the E2-P state with bound Mg2+ at 3.1 angstrom resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-49450:
Cryo-EM structure of an MgtA tetramer in E2-P and E1-like states
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9nhz:
Cryo-EM structure of an MgtA tetramer in E2-P and E1-like states
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-72977:
Octopus sensory receptor CRT1 bound to Progesterone
Method: single particle / : Jiang H, Hibbs RE

PDB-9yi4:
Octopus sensory receptor CRT1 bound to Progesterone
Method: single particle / : Jiang H, Hibbs RE

EMDB-54629:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54630:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54631:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54632:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6r:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6s:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6t:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6u:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-53123:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53148:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53152:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53171:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53172:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53180:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53181:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53182:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qfx:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qgu:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qh1:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhj:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhk:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhv:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhw:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhx:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-75195:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-75196:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

PDB-10ij:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

PDB-10ik:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-70486:
CryoEM structure of Toxin B (TcdB) from clostridioides difficile complexed with taurochenodeoxycholic acid (TCDCA)
Method: single particle / : Miletic S, Li Z, Melnyk RA

EMDB-70487:
CryoEM structure of Toxin B (TcdB) from clostridioides difficile complexed with methyl cholate
Method: single particle / : Miletic S, Li Z, Melnyk RA

EMDB-70488:
CryoEM structure of apo Toxin B (TcdB) from Clostridioides difficile in the closed CROP state
Method: single particle / : Miletic S, Li Z, Melnyk RA

EMDB-70489:
CryoEM structure of apo Toxin B (TcdB) from Clostridioides difficile in the open CROP state
Method: single particle / : Miletic S, Li Z, Melnyk RA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more