[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,792 items for (author: oh & b)

EMDB-76291:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

PDB-12bp:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

EMDB-49668:
Cryo electron microscopic analysis of the adduct of syringolin analog with the Mtb 20S proteasome
Method: single particle / : Gu X, Yu Z

EMDB-76140:
Cryo-EM structure of Candida albicans fluoride channel FEX in complex with Fab fragment in LiCl
Method: single particle / : Kang CY, Stockbridge RB

EMDB-52705:
Cryo-EM structure of PSII intermediate Psb27-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

EMDB-52706:
Cryo-EM structure of PSII intermediate Psb32-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

PDB-9i82:
Cryo-EM structure of PSII intermediate Psb27-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

PDB-9i83:
Cryo-EM structure of PSII intermediate Psb32-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

EMDB-76384:
Cryo-EM structure of BCMA in complex with the BCMA-targeted Fab arm of teclistamab and the Fab fragment of an anti-lambda light chain antibody REGN15499
Method: single particle / : Zhou Y, Franklin MC

EMDB-76385:
Cryo-EM structure of BCMA in complex with the BCMA-targeted Fab arm of linvoseltamab and the Fab fragment of an anti-kappa light chain antibody REGN654
Method: single particle / : Zhou Y, Franklin MC

PDB-12er:
Cryo-EM structure of BCMA in complex with the BCMA-targeted Fab arm of teclistamab and the Fab fragment of an anti-lambda light chain antibody REGN15499
Method: single particle / : Zhou Y, Franklin MC

PDB-12es:
Cryo-EM structure of BCMA in complex with the BCMA-targeted Fab arm of linvoseltamab and the Fab fragment of an anti-kappa light chain antibody REGN654
Method: single particle / : Zhou Y, Franklin MC

EMDB-63380:
Cryo-EM structure of Rhizobium etli MprF complexed with Lys-N-tRNA(Lys)
Method: single particle / : Nishimura M, Hirano H, Gill CP, Phan CNK, Gamper HB, Will A, Yamashita K, Yashiro Y, Kobayashi K, Kise Y, Kusakizako T, Itoh Y, Tomita K, Hou YM, Nishizawa T, Roy H, Nureki O

EMDB-63384:
Cryo-EM map of Rhizobium etli MprF complexed with Lys-N-tRNA(Lys) with the improved density of the anticodon stem loop of Lys-N-tRNA(Lys)
Method: single particle / : Nishimura M, Hirano H, Gill CP, Phan CNK, Gamper HB, Will A, Yamashita K, Kobayashi K, Kise Y, Kusakizako T, Itoh Y, Hou YM, Nishizawa T, Roy H, Nureki O

PDB-9ltt:
Cryo-EM structure of Rhizobium etli MprF complexed with Lys-N-tRNA(Lys)
Method: single particle / : Nishimura M, Hirano H, Gill CP, Phan CNK, Gamper HB, Will A, Yamashita K, Yashiro Y, Kobayashi K, Kise Y, Kusakizako T, Itoh Y, Tomita K, Hou YM, Nishizawa T, Roy H, Nureki O

EMDB-55458:
In-cell structure of dark-treated chlL-deleted C.reinhardtii chloroplast 70S ribosome in translation state
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55459:
In-cell structure of dark-treated chlL-deleted C.reinhardtii chloroplast 70S ribosome in non-translation state
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55461:
In-cell structure of light-treated chlL-deleted C.reinhardtii chloroplast 70S ribosome in translation state
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55462:
In-cell structure of light-treated chlL-deleted C.reinhardtii chloroplast 70S ribosome in non-translation state
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55463:
In-cell structure of dark-treated wild-type C.reinhardtii chloroplast 70S ribosome in translation state
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55464:
In-cell structure of chlL-deleted C.reinhardtii chloroplast F-ATPase
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55465:
In-cell structure of chlL-deleted C.reinhardtii cytoplasmic 80S ribosome
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55466:
In-cell structure of chlL-deleted C.reinhardtii RuBisCo
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-54626:
Cryo-EM structure of human caspase-9 CARD (WT) filament
Method: helical / : Rawal S, Bohn S, Alderson TR, Madl T, Pavkov-Keller T, Desfosses A

PDB-9s6f:
Cryo-EM structure of human caspase-9 CARD (WT) filament
Method: helical / : Rawal S, Bohn S, Alderson TR, Madl T, Pavkov-Keller T, Desfosses A

EMDB-54625:
Cryo-EM structure of human caspase-9 CARD (H38R) mutant filament
Method: helical / : Rawal S, Bohn S, Alderson TR, Madl T, Pavkov-Keller T, Desfosses A

PDB-9s6e:
Cryo-EM structure of human caspase-9 CARD (H38R) mutant filament
Method: helical / : Rawal S, Bohn S, Alderson TR, Madl T, Pavkov-Keller T, Desfosses A

EMDB-56343:
Cryo-EM structure of human VPS34-CI in complex with GABARAP - alternative conformation, local refinement on BECLIN1 and ATG14L C-terminal domains.
Method: single particle / : Dessus AN, Williams RL

EMDB-56345:
Cryo-EM structure of human VPS34-CI in complex with GABARAP - alternative conformation, consensus map
Method: single particle / : Dessus AN, Williams RL

EMDB-56346:
Cryo-EM structure of human VPS34-CI in complex with GABARAP, consensus map
Method: single particle / : Dessus AN, Williams RL

EMDB-56347:
Cryo-EM structure of human VPS34-CI in complex with GABARAP, local refinement on VPS34 and VPS15 kinase domains.
Method: single particle / : Dessus AN, Williams RL

EMDB-56348:
Cryo-EM structure of human VPS34-CI in complex with GABARAP, local refinement on the core of VPS34-CI.
Method: single particle / : Dessus AN, Williams RL

EMDB-56350:
Cryo-EM structure of human VPS34-CI in complex with GABARAP, local refinement on VPS15 helical solenoid, and BECLIN1 and ATG14L N-terminal domains.
Method: single particle / : Dessus AN, Williams RL

EMDB-56351:
Cryo-EM structure of human VPS34-CI in complex with GABARAP, local refinement on GABARAP.
Method: single particle / : Dessus AN, Williams RL

EMDB-56353:
Cryo-EM structure of human VPS34-CI in complex with GABARAP, local refinement on BECLIN1 and ATG14L C-terminal domains.
Method: single particle / : Dessus AN, Williams RL

EMDB-56357:
Cryo-EM structure of human VPS34-CI in complex with GABARAP, composite map
Method: single particle / : Dessus AN, Williams RL

EMDB-56358:
Cryo-EM structure of human VPS34-CI in complex with GABARAP - alternative conformation, composite map
Method: single particle / : Dessus AN, Williams RL

EMDB-56454:
Cryo-EM structure of human VPS34-CI with ADP:MgF3 - consensus map
Method: single particle / : Dessus AN, Williams RL

EMDB-56455:
Cryo-EM structure of human VPS34-CI with ADP:MgF3 - local refinement on the complex base
Method: single particle / : Dessus AN, Williams RL

EMDB-56456:
Cryo-EM structure of human VPS34-CI with ADP:MgF3 - local refinement on VPS34 and VPS15 kinases
Method: single particle / : Dessus AN, Williams RL

EMDB-56457:
Cryo-EM structure of human VPS34-CI with ADP:MgF3 - local refinement on ATG14L and BECLIN1 C-termini
Method: single particle / : Dessus AN, Williams RL

EMDB-56458:
Cryo-EM structure of human VPS34-CI with ADP:MgF3 - composite map
Method: single particle / : Dessus AN, Williams RL

EMDB-71756:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened consensus map from cryoSPARC non-uniform refinement)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71757:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened AHD1 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71758:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened AHD2 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71759:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened CORE1 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71760:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened CORE2 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71761:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened WalkerB1 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71762:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened WalkerB2 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71763:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened NBD1 plus T2a local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more