[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 495 items for (author: martin & cl)

EMDB-72969:
AJ09-21 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72970:
AJ09-83 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72971:
AJ09-110 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72973:
AM12-347 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72985:
AM12-351 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72986:
AM12-352 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72987:
NN39-25 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72988:
NN39-171 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72989:
V634-136 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72990:
V634-136 UCA Fab in complex with HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72991:
V645-158 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72992:
HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72993:
HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72994:
HIV-1 Env del8-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-56440:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56441:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56442:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 4.8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56443:
CryoEM map of dimeric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56444:
CryoEM map of tetrameric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-53855:
CryoEM structure of a membrane protein associated with a contractile injection in Salmonella enterica subspecies salamae
Method: single particle / : Ejaz RN, Tillmann HP, Taylor NMI, Siborova M, Sofos NH

EMDB-53857:
Cryo-EM structure of an extracellular contractile injection system in Salmonella enterica subspecies salamae, the sheath and inner tube module in extended state.
Method: helical / : Ejaz RN, Tillmann HP, Sofos NH, Siborova M, Taylor NMI

EMDB-53858:
Cryo-EM structure of an extracellular contractile injection system in Salmonella enterica subspecies salamae, the sheath in contracted state.
Method: helical / : Ejaz RN, Tillmann HP, Taylor NMI, Siborova M, Sofos NH

EMDB-53859:
Cryo-EM structure of a contractile injection system in Salmonella enterica subspecies Salamae, the cap portion in extended state.
Method: single particle / : Ejaz RN, Tillmann HP, Sofos NH, Siborova M, Taylor NMI

EMDB-53919:
Cryo-EM structure of a contractile injection system in Salmonella enterica subspecies Salamae, the baseplate portion in extended state.
Method: single particle / : Ejaz RN, Tillmann HP, Sofos NH, Siborova M, Taylor NMI

PDB-9r9a:
CryoEM structure of a membrane protein associated with a contractile injection in Salmonella enterica subspecies salamae
Method: single particle / : Ejaz RN, Tillmann HP, Taylor NMI, Siborova M, Sofos NH

PDB-9r9h:
Cryo-EM structure of an extracellular contractile injection system in Salmonella enterica subspecies salamae, the sheath and inner tube module in extended state.
Method: helical / : Ejaz RN, Tillmann HP, Sofos NH, Siborova M, Taylor NMI

PDB-9r9i:
Cryo-EM structure of an extracellular contractile injection system in Salmonella enterica subspecies salamae, the sheath in contracted state.
Method: helical / : Ejaz RN, Tillmann HP, Taylor NMI, Siborova M, Sofos NH

PDB-9r9n:
Cryo-EM structure of a contractile injection system in Salmonella enterica subspecies Salamae, the cap portion in extended state.
Method: single particle / : Ejaz RN, Tillmann HP, Sofos NH, Siborova M, Taylor NMI

PDB-9rce:
Cryo-EM structure of a contractile injection system in Salmonella enterica subspecies Salamae, the baseplate portion in extended state.
Method: single particle / : Ejaz RN, Tillmann HP, Sofos NH, Siborova M, Taylor NMI

EMDB-54248:
Trispecific fab 17 with O1M 93C virus like particle
Method: single particle / : Stuart DI, Duyvesteyn HME, Ren J, Fry EE

EMDB-54261:
Trispecific fab 34 with O1M 93C virus like particle
Method: single particle / : Stuart DI, Duyvesteyn HME, Ren J, Fry EE

EMDB-54263:
Trispecific fab 49 with O1M 93C virus like particle
Method: single particle / : Stuart DI, Duyvesteyn HME, Ren J, Fry EE

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9pit:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9piv:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-49835:
SARS-CoV-2 BA.1 S6P (HexaPro) + COV2-3835 Fab Local Refinement Map (RBD + Fv)
Method: single particle / : Ramamohan AR, Johnson NV, McLellan JS

PDB-9nvg:
Structure of SARS-CoV-2 BA.1 spike RBD bound to COV2-3835 Fab
Method: single particle / : Ramamohan AR, Johnson NV, McLellan JS

EMDB-49520:
Focused refinement of the prefusion F glycoprotein ectodomain of Nipah virus in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-71534:
Nub1/Fat10-processing human 26S proteasome with Rpt2 at top of spiral staircase and partially unfolded Eos (AAA+ motor locally refined)
Method: single particle / : Arkinson C, Gee CL, Martin A

EMDB-71537:
Nub1/Fat10-processing human 26S proteasome with Rpt5 at top of spiral staircase (AAA+ locally refined)
Method: single particle / : Arkinson C, Gee CL, Martin A

EMDB-71538:
Nub1/Fat10-processing human 26S proteasome with Rpt1 at top of spiral staircase (AAA+ locally refined)
Method: single particle / : Arkinson C, Gee CL, Martin A

EMDB-71581:
Nub1/Fat10-processing human 26S proteasome bound to TXNL1 with Rpt3 at top of spiral staircase
Method: single particle / : Arkinson C, Gee CL, Martin A

EMDB-71583:
NUB1/FAT10-processing human 26S proteasome bound to TXNL1 with Rpt6 at top of spiral staircase
Method: single particle / : Arkinson C, Gee CL, Martin A

EMDB-71584:
Nub1/Fat10-processing human 26S proteasome with Rpt4 at top of spiral staircase (AAA+ motor locally refined)
Method: single particle / : Arkinson C, Gee CL, Martin A

EMDB-51847:
80S Ribosome Average for EMPIAR-11830
Method: subtomogram averaging / : Khavnekar S

EMDB-51848:
RuBisCo Average for EMPIAR-11830
Method: subtomogram averaging / : Khavnekar S

EMDB-72735:
HIV-1 Env Q23 NFL TD CC3+ in complex with NHP Q9 V2-apex polyclonal antibody Fabs isolated post-2 immunizations
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-72736:
HIV-1 Env Q23 NFL TD CC3+ in complex with NHP Q10 V2-apex polyclonal antibody Fabs isolated post-2 immunizations
Method: single particle / : Lee WH, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more