[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 716 items for (author: lyu & j)

EMDB-53844:
Cryo-EM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with weakly bound effector CCG28 (C2-symmetry)
Method: single particle / : Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-53375:
Cryo-EM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with effector CCG40 (C2-symmetry)
Method: single particle / : Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-53346:
CryoEM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with effector CCG40 (focused refinement)
Method: single particle / : Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-53235:
Cryo-EM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with effector CCG40
Method: single particle / : Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-63803:
Plant chloroplast dicarboxylate transporter AtDiT1
Method: single particle / : Yang Z, Zhang P

EMDB-63804:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with OAA
Method: single particle / : Yang Z, Zhang P

EMDB-63805:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with 2-OG
Method: single particle / : Yang Z, Zhang P

EMDB-63806:
Plant chloroplast dicarboxylate transporter AtDiT2.1
Method: single particle / : Yang Z, Zhang P

EMDB-63807:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with malate
Method: single particle / : Yang Z, Zhang P

EMDB-63808:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with Glu
Method: single particle / : Yang Z, Zhang P

PDB-9mcr:
Plant chloroplast dicarboxylate transporter AtDiT1
Method: single particle / : Yang Z, Zhang P

PDB-9mcs:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with OAA
Method: single particle / : Yang Z, Zhang P

PDB-9mct:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with 2-OG
Method: single particle / : Yang Z, Zhang P

PDB-9mcu:
Plant chloroplast dicarboxylate transporter AtDiT2.1
Method: single particle / : Yang Z, Zhang P

PDB-9mcv:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with malate
Method: single particle / : Yang Z, Zhang P

PDB-9u32:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with Glu
Method: single particle / : Yang Z, Zhang P

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9pit:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9piv:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-72221:
AK01 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

EMDB-72222:
XZ440 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

PDB-9q50:
AK01 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

PDB-9q57:
XZ440 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

EMDB-44485:
iSAT PNA - ctrl-C-a2
Method: single particle / : Sheng K, Dong X, Williamson JR

EMDB-51810:
Cryo-EM structure of an octameric G10-resistosome from wheat
Method: single particle / : Guo GH, Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-51852:
Cryo-EM structure of an octameric G10-resistosome from wheat (N-to-N arrangement)
Method: single particle / : Guo GH, Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-51910:
Cryo-EM structure of an octameric G10-resistosome from wheat in 'back-to-back' arrangement
Method: single particle / : Guo GH, Zhao H, Lukoyanova N, Selvaraj M, Jones J

PDB-9h2l:
Cryo-EM structure of an octameric G10-resistosome from wheat
Method: single particle / : Guo GH, Zhao H, Lukoyanova N, Selvaraj M, Jones J

PDB-9h4i:
Cryo-EM structure of an octameric G10-resistosome from wheat (N-to-N arrangement)
Method: single particle / : Guo GH, Zhao H, Lukoyanova N, Selvaraj M, Jones J

PDB-9h73:
Cryo-EM structure of an octameric G10-resistosome from wheat in 'back-to-back' arrangement
Method: single particle / : Guo GH, Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-48182:
hCXCR4-CXCL12 complex with 1:1 stoichiometry
Method: single particle / : Zhang Z, Patel DJ

EMDB-48215:
Global structure of hCXCR4 and HIV-2 gp120
Method: single particle / : Zhang Z, Patel DJ

EMDB-48218:
cryoEM structure of hCXCR4 tetramer bound to HIV-2/gp120/V3 loop
Method: single particle / : Zhang Z, Patel DJ

EMDB-48219:
CXCR4-HIV-2/gp120-CD4
Method: single particle / : Zhang Z, Patel DJ

EMDB-48220:
CXCR4 tetramer bound to 4 CXCL12 dimers
Method: single particle / : Zhang Z, Patel DJ

PDB-9me1:
hCXCR4-CXCL12 complex with 1:1 stoichiometry
Method: single particle / : Zhang Z, Patel DJ

PDB-9mej:
Global structure of hCXCR4 and HIV-2 gp120
Method: single particle / : Zhang Z, Patel DJ

PDB-9men:
CryoEM structure of hCXCR4 tetramer bound to HIV-2/gp120/V3 loop
Method: single particle / : Zhang Z, Patel DJ

PDB-9met:
CXCR4-HIV-2/gp120-CD4
Method: single particle / : Zhang Z, Patel DJ

PDB-9meu:
CXCR4 tetramer bound to 4 CXCL12 dimers
Method: single particle / : Zhang Z, Patel DJ

EMDB-44444:
PaMsbA in an occluded, outward conformation
Method: single particle / : Bahramimoghaddam H, Laganowsky A

EMDB-44445:
PaMsbA in an open, outward conformation
Method: single particle / : Bahramimoghaddam H, Laganowsky A

PDB-9bd6:
PaMsbA in an occluded, outward conformation
Method: single particle / : Bahramimoghaddam H, Laganowsky A

PDB-9bd7:
PaMsbA in an open, outward conformation
Method: single particle / : Bahramimoghaddam H, Laganowsky A

EMDB-70838:
Rabbit 37496 base and V1/V3 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70839:
Rabbit 37496 base and gp41-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70840:
Rabbit 37496 base and gp120-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70846:
Rabbit 37496 base and C3V5 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70847:
Rabbit 37450 base, gp41-FP and gp120int epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more