[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,514 items for (author: lu & x)

EMDB-69221:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-69482:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN)
Method: single particle / : Li XZ, Jiang Y

EMDB-69484:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN-DDB1)
Method: single particle / : Li XZ, Jiang Y

EMDB-69485:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 consensus refinement
Method: single particle / : Li XZ, Jiang Y

PDB-23sr:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-71740:
Human 26S proteasome bound to TXNL1 with opened gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71741:
Human 26S proteasome bound to TXNL1 with closed gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71813:
Human 19S proteasome bound to TXNL1 PITH domain but with low density for RPT1, RPT2, and RPN1
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-55775:
apo state of CydDC in nanodisc
Method: single particle / : Changbin Z, Yongbo L, Lili Y

EMDB-67054:
CydDC in nanodisc with AMP-PNP-bound
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67055:
CydDC in nanodisc with ATP
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67183:
CydDC in nanodisc with heme-bound I
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67273:
CydDC in nanodisc with heme-bound II
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9tby:
apo state of CydDC in nanodisc
Method: single particle / : Changbin Z, Yongbo L, Lili Y

PDB-9xno:
CydDC in nanodisc with AMP-PNP-bound
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xnp:
CydDC in nanodisc with ATP
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xsm:
CydDC in nanodisc with heme-bound I
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xuo:
CydDC in nanodisc with heme-bound II
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-76733:
SARS-CoV-2 RNA-dependent RNA polymerase in complex with 4'-FlA nucleotide analogue
Method: single particle / : Park S, Gharpure A, Ward AB

PDB-12sn:
SARS-CoV-2 RNA-dependent RNA polymerase in complex with 4'-FlA nucleotide analogue
Method: single particle / : Park S, Gharpure A, Ward AB

EMDB-81411:
GRM1-Acc State Conformation 2
Method: single particle / : Lu Y, Wen TL, Shen YQ, Yang X

PDB-27tm:
GRM1-Acc State Conformation 2
Method: single particle / : Lu Y, Wen TL, Shen YQ, Yang X

EMDB-62783:
Structure of ENBT1 in the apo state
Method: single particle / : Yin YX, Ding D, Lu YS

PDB-9l38:
Structure of ENBT1 in the apo state
Method: single particle / : Yin YX, Ding D, Lu YS

PDB-9nz0:
Cryo-EM structure of vaccine elicited antibody 22F5 bound to the post-fusion conformation of the LayV-F glycoprotein
Method: single particle / : Kumar U, May A, Acharya P

EMDB-63580:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63581:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63583:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-80947:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-26xh:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-9m1r:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1s:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1u:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63852:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

PDB-9u4o:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

EMDB-72009:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72031:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72033:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72035:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-74449:
Q7M-675 Fab in complex with HIV-1 Env WITO NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9py5:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyd:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyh:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyk:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-52224:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

PDB-9hjq:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

EMDB-73803:
Cryo-EM structure of human Wntless in complex with Wnt5a at 1:1 stoichiometry
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Wang Z, Salic A, Jiang J, Huang P

EMDB-73810:
Cryo-EM structure of human Wntless in its apo state
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73835:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map A
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73836:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map B
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more