[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 186 items for (author: liu & md)

EMDB-68865:
Cryo-EM structure of RSC complex from Chaetomium thermophilum
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68925:
Cryo-EM structure of SWI/SNF complex from Chaetomium thermophilum
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68926:
The focused refined map for ATPase-ARP-NCP region from the Chaetomium thermophilum RSC-NCP complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68927:
The consensus map for the complete Chaetomium thermophilum RSC-NCP complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68928:
The focused refined map for the base module from the Chaetomium thermophilum RSC-NCP complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68935:
Cryo-EM structure of Chaetomium thermophilum RSC bound to a nucleosome
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68940:
The consensus map for the complete Chaetomium thermophilum SWI/SNF-NCP complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68942:
The focused refined map for the base module from the Chaetomium thermophilum SWI/SNF-NCP complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68952:
The focused refined map for the ATPase-ARP module from the Chaetomium thermophilum SWI/SNF-NCP complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68953:
The focused refined map for the nucleosome region from the Chaetomium thermophilum SWI/SNF-NCP complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-68999:
Cryo-EM structure of Chaetomium thermophilum SWI/SNF bound to a nucleosome
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-69438:
The consensus map for the Chaetomium thermophilum RSC complex in the free state
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-69475:
The focused refined map for RSC-specific lobe of the Chaetomium thermophilum RSC complex
Method: single particle / : Ma SS, Liu MD, Shen QT, Chen Y

EMDB-73703:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), consensus map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73704:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), left wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73705:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), right wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73707:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex (RECC), tRNA focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73706:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), composite map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

PDB-9z0h:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2)
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-75346:
Membrane protein solubilization and structure determination using de novo-designed amphipathic proteins
Method: single particle / : Borst AJ, Weidle C

EMDB-75350:
WRAP-TP0698
Method: single particle / : Borst AJ

EMDB-76371:
Half-translocated RNA polymerase elemental paused elongation complex, swiveled with ppGpp (ePEC swiveled + ppGpp)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-76372:
Half-translocated RNA polymerase elemental paused elongation complex, swiveled (ePEC swiveled)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-76373:
Pre-translocated RNA polymerase elemental paused elongation complex, TL open with ppGpp (ePEC open + ppGpp)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-76374:
Pre-translocated RNA polymerase elemental paused elongation complex, TL open (ePEC open)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-76375:
Pre-translocated RNA polymerase elemental paused elongation complex, TL semiclosed with ppGpp (ePEC semiclosed + ppGpp)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-76376:
Pre-translocated RNA polymerase elemental paused elongation complex, TL semiclosed (ePEC semiclosed)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-76377:
Pre-translocated RNA polymerase elemental paused elongation complex, TL closed with ppGpp (ePEC closed + ppGpp)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-76378:
Pre-translocated RNA polymerase elemental paused elongation complex, TL closed (ePEC closed)
Method: single particle / : Mueller AU, Darst SA, Landick R

EMDB-70890:
C1 symmetry cryoEM structure of the soluble-WRAPed membranous portion of MspA (Mycobacterium smegmatis porin), dimerized along the native interface.
Method: single particle / : Weidle C, Carr KD, Alexis C, Borst AJ

EMDB-73963:
cryoEM structure of COMMD-like protein S4Y171 octamer
Method: single particle / : Healy MD, Collins BM, Liu M, Cater RJ, Blades F

EMDB-73964:
cryoEM structure of COMMD-like protein S4Y171 octamer
Method: single particle / : Healy MD, Collins BM, Liu M, Cater RJ, Blades F

EMDB-70780:
CryoEM structure of the soluble-WRAPed membranous portion of MspA (Mycobacterium smegmatis porin), dimerized along the native interface.
Method: single particle / : Carr KD, Weidle C, Alexis C, Borst AJ

EMDB-75290:
cryoEM map for soluble OmpA beta-barrel WRAPs
Method: single particle / : Courbet A, Mihaljevic L

EMDB-75291:
cryoEM map of OmpA helical WRAP
Method: single particle / : Courbet A, Mihaljevic L

EMDB-64935:
Lectin FRIL from Lablab purpureus complexed to Lewis X tetrasaccharide
Method: single particle / : Nguyen VHT, Chen X, Liu YM, Ma C

EMDB-64936:
Lectin FRIL from Lablab purpureus with self glycan
Method: single particle / : Nguyen VHT, Liu YM, Chen X, Ma C

EMDB-64937:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-64938:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

PDB-9vbx:
Lectin FRIL from Lablab purpureus complexed to Lewis X tetrasaccharide
Method: single particle / : Nguyen VHT, Chen X, Liu YM, Ma C

PDB-9vby:
Lectin FRIL from Lablab purpureus with self glycan
Method: single particle / : Nguyen VHT, Liu YM, Chen X, Ma C

PDB-9vbz:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

PDB-9vc0:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-53353:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

EMDB-46785:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), consensus map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46786:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), left wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46787:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), right wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46789:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), tail focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46791:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), composite map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

PDB-9dei:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1)
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more