[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,416 items for (author: lin & sc)

EMDB-54547:
Cerebellar GluA1/4 NTD tetramer (focused refinement)

PDB-9s3q:
Cerebellar GluA1/4 NTD tetramer (focused refinement)

EMDB-53246:
Consensus refinement: Ternary complex of the human 20S proteasome in complex with Importin-9 and two homo dimers of Akirin-2. Focussed refinement

EMDB-53248:
Ternary complex of the human 20S proteasome in complex with Importin-9 and two homodimers of Akirin-2 - focussed refinement on Importin-9 and Akirin-2

EMDB-53264:
Ternary complex of the human 20S proteasome in complex with Importin-9 and two homodimers of Akirin-2 - focussed refinement on the alpha subunits, Ipo-9 and Ak2

EMDB-53265:
Composite map: Ternary complex of the human 20S proteasome in complex with Importin-9 and two homodimers of Akirin-2

EMDB-53266:
Binary complex of human Importin-9 with one homodimer of Akirin-2

EMDB-72358:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (consensus structure)

EMDB-72359:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (head structure)

EMDB-72361:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (body structure)

EMDB-72362:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (substrate structure)

PDB-9xzj:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (consensus structure)

PDB-9xzk:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (head structure)

PDB-9xzl:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (body structure)

PDB-9xzm:
Cryo-EM structure of F-box helicase 1 (FBH1) bound to an SCF ubiquitin ligase complex and a 3-way DNA fork (substrate structure)

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP

EMDB-52860:
Ku70/80 bound to 147 bp nucleosome

EMDB-52861:
Ku70/80 bound to 153 bp nucleosome

EMDB-52879:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome

EMDB-52912:
Ku70/80 bound to a 153 bp H2AX nucleosome

EMDB-52958:
DNA-PK bound to a 153 bp H2AX nucleosome model 1

EMDB-53025:
DNA-PK bound to 153 bp H2AX nucleosome model 2

EMDB-53026:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome

EMDB-53237:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS

PDB-9igw:
Ku70/80 bound to 147 bp nucleosome

PDB-9igx:
Ku70/80 bound to 153 bp nucleosome

PDB-9q80:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome

PDB-9q8x:
Ku70/80 bound to a 153 bp H2AX nucleosome

PDB-9q9f:
DNA-PK bound to a 153 bp H2AX nucleosome model 1

PDB-9qcr:
DNA-PK bound to 153 bp H2AX nucleosome model 2

PDB-9qcs:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome

PDB-9qms:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS

EMDB-48622:
Structure of a native Drosophila melanogaster Pol II Elongation Complex with a well-defined Rpb4/Rpb7 stalk

PDB-9mu7:
Structure of a native Drosophila melanogaster Pol II Elongation Complex with a well-defined Rpb4/Rpb7 stalk

EMDB-54556:
Cerebellar GluA1/4 LBD tetramer (focused refinement)

PDB-9s3z:
Cerebellar GluA1/4 LBD tetramer (focused refinement)

EMDB-54543:
Cerebellar GluA2/4 NTD heterophilic tetramer interface (focused refinement)

EMDB-54558:
Cerebellar GluA1/4 TMD with TARP gamma 7 (focused refinement)

EMDB-54559:
Cerebellar GluAx/A4 TMD with four TARPs (focused refinement)

EMDB-55413:
GluA4 N-terminal domain bound to nanobody NB74 (focused refinement)

EMDB-55414:
GluA4 LBD-TMD with TARP gamma 2 (focused refinement)

EMDB-55418:
GluA4 with TARP gamma2 (consensus refinement)

EMDB-55419:
Full-length GluA4 with TARP gamma 2 (composite map)

PDB-9s3o:
Cerebellar GluA2/4 NTD heterophilic tetramer interface (focused refinement)

PDB-9s41:
Cerebellar GluA1/4 TMD with TARP gamma 7 (focused refinement)

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12

EMDB-71329:
In situ human P-Z state 80S ribosome

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more