[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,400 items for (author: lin & cc)

EMDB-72926:
Pseudomonas aeruginosa 50S ribosome (L1 stalk domain 'out' conformation and missing uL1 and tRNA)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72962:
Pseudomonas aeruginosa 50S ribosome (L1 stalk domain 'out' conformation)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-79039:
Australian bat lyssavirus glycoprotein PH domain in complex with broadly neutralizing human antibodies A6 and RVC20
Method: single particle / : Xu K, Xu Y

EMDB-72874:
Pseudomonas aeruginosa 50S ribosome (base map)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72895:
Pseudomonas aeruginosa 50S ribosome (CP local map)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72896:
Pseudomonas aeruginosa 50S ribosome (L7/L12 stalk local map)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72904:
Pseudomonas aeruginosa 50S ribosome (L1 stalk domain 'in' conformation)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72907:
Pseudomonas aeruginosa 50S ribosome (L1 Stalk domain 'mid' conformation)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72217:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'mid' conformation)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72218:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk 'in' conformation)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72219:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'out' conformation)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72220:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'out' conformation and missing uL1 and tRNA)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72256:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (base map)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72258:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (CP local map)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72272:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 Stalk domain 'in' conformation)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-72273:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 Stalk domain 'mid' conformation)
Method: single particle / : Findlay JL, Lawrence CM, Kanik M, Franklin MJ, Gauvin CC

EMDB-72274:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L7/L12 Stalk local map)
Method: single particle / : Findlay JL, Lawrence CM, Kanik M, Franklin MJ, Gauvin CC

EMDB-72275:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 Stalk domain 'out' conformation)
Method: single particle / : Findlay JL, Lawrence CM, Kanik M, Franklin MJ, Gauvin CC

EMDB-72276:
Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 Stalk domain 'out' conformation and missing uL1 and tRNA)
Method: single particle / : Findlay JL, Kanik M, Gauvin CC, Franklin MJ, Lawrence CM

EMDB-48426:
Cryo-EM local map of six VRC35 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin head
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Kanekiyo M, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-48427:
Cryo-EM local map of dimeric VRC35 Fabs bound to N-linked glycans N126, N165, and N246 on influenza H3N2 Victoria 2011 hemagglutinin head
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Kanekiyo M, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-49628:
Composite map of three pairs of dimeric VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-49633:
Global map of six VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-74798:
Cryo-EM local density map of VRC35 Fab bound to N-linked glycans on the SARS-CoV-2 LP.8.1.9 spike protein
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-74801:
Cryo-EM map of VRC35 Fab bound to the SARS-CoV-2 LP.8.1.9 spike protein
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-74843:
Cryo-EM map of VRC35 Fab bound to the Lassa virus glycoprotein complex
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

PDB-9npm:
Composite map of three pairs of dimeric VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-72353:
Cryo-EM structure of ALK in complex with CRBN/DDB1 and TRI-611
Method: single particle / : Bart AG, Kamadurai HB

PDB-9xzg:
Cryo-EM structure of ALK in complex with CRBN/DDB1 and TRI-611
Method: single particle / : Bart AG, Kamadurai HB

EMDB-75126:
E. coli TGT covalent intermediate with 2 tRNAs
Method: single particle / : Harjung A, Devaraj N

PDB-10fc:
E. coli TGT covalent intermediate with 2 tRNAs
Method: single particle / : Harjung A, Devaraj N

EMDB-75124:
E. coli tRNA guanine transgylcosylase
Method: single particle / : Harjung A, Devaraj N

EMDB-75125:
E. coli TGT covalent intermediate with 1 tRNA
Method: single particle / : Harjung A, Devaraj N

PDB-10fa:
E. coli tRNA guanine transgylcosylase
Method: single particle / : Harjung A, Devaraj N

PDB-10fb:
E. coli TGT covalent intermediate with 1 tRNA
Method: single particle / : Harjung A, Devaraj N

EMDB-75723:
Refined plasminogen binding group A streptococcus M-like protein isolate from AP53 bound to human plasminogen
Method: single particle / : Readnour BM, Tjia-Fleck SK, Castellino FJ

EMDB-71602:
Cryo-EM structure of VX77 Fab in complex with GII.4 Norovirus P domain
Method: single particle / : Jo G, Ward AB

EMDB-71603:
Cryo-EM structure of VX93 Fab in complex with GII.4 Norovirus P domain
Method: single particle / : Jo G, Ward AB

EMDB-72540:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX77 Fab
Method: single particle / : Jo G, Ward AB

EMDB-72541:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab
Method: single particle / : Jo G, Ward AB

EMDB-72542:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (4 Fabs)
Method: single particle / : Jo G, Ward AB

EMDB-72543:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (5 Fabs-1)
Method: single particle / : Jo G, Ward AB

EMDB-72544:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (5 Fabs-2)
Method: single particle / : Jo G, Ward AB

EMDB-72545:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (3 Fabs-1)
Method: single particle / : Jo G, Ward AB

EMDB-72546:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (3 Fabs-2)
Method: single particle / : Jo G, Ward AB

EMDB-72547:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (1 Fab)
Method: single particle / : Jo G, Ward AB

EMDB-72548:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (2 Fabs-1)
Method: single particle / : Jo G, Ward AB

EMDB-72549:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (2 Fabs-2)
Method: single particle / : Jo G, Ward AB

EMDB-72550:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (2 Fabs-3)
Method: single particle / : Jo G, Ward AB

EMDB-72551:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (3 Fabs)
Method: single particle / : Jo G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more