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TitleLessons learned from a Kaggle challenge for particle picking in cryo-electron tomography
Journal, issue, pagesBiorxiv, Year 2025
Publish dateOct 28, 2025 (structure data deposition date)
AuthorsPeck A / Hutchings J / Schwartz J / Yu Y / Ermel UH / Kandel S / Kimanius D / Zhao Z / Zheng S / Artley B ...Peck A / Hutchings J / Schwartz J / Yu Y / Ermel UH / Kandel S / Kimanius D / Zhao Z / Zheng S / Artley B / List D / Silva SA / Reade W / Asuncion J / Evans K / Gadling J / Khandwala K / McCanny S / McCarthy DG / Ni JX / Pourroy J / Venkatakrishnan M / Wang ZS / Agard DA / Potter CS / Carragher B / Harrington K / Paraan M
External linksBiorxiv / Search PubMed
MethodsEM (subtomogram averaging)
Resolution4.7 - 11.0 Å
Structure data

EMDB-73631: The Kaggle CryoET Object Identification Challenge: ground truth 80S ribosome
Method: EM (subtomogram averaging) / Resolution: 4.8 Å

EMDB-73633: The Kaggle CryoET Object Identification Challenge: first place 80S ribosome
Method: EM (subtomogram averaging) / Resolution: 4.7 Å

EMDB-73634: The Kaggle CryoET Object Identification Challenge: ground truth apo-ferritin
Method: EM (subtomogram averaging) / Resolution: 5.0 Å

EMDB-73635: The Kaggle CryoET Object Identification Challenge: first place apo-ferritin
Method: EM (subtomogram averaging) / Resolution: 6.0 Å

EMDB-73636: The Kaggle CryoET Object Identification Challenge: ground truth virus-like-particle
Method: EM (subtomogram averaging) / Resolution: 5.1 Å

EMDB-73637: The Kaggle CryoET Object Identification Challenge: first place virus-like-particle
Method: EM (subtomogram averaging) / Resolution: 5.4 Å

EMDB-73638: The Kaggle CryoET Object Identification Challenge: ground truth beta-galactosidase
Method: EM (subtomogram averaging) / Resolution: 8.1 Å

EMDB-73639: The Kaggle CryoET Object Identification Challenge: first place beta-galactosidase
Method: EM (subtomogram averaging) / Resolution: 8.3 Å

EMDB-73640: The Kaggle CryoET Object Identification Challenge: ground truth beta-amylase
Method: EM (subtomogram averaging) / Resolution: 11.0 Å

EMDB-73641: The Kaggle CryoET Object Identification Challenge: first place beta-amylase
Method: EM (subtomogram averaging) / Resolution: 10.6 Å

EMDB-73642: The Kaggle CryoET Object Identification Challenge: ground truth thyroglobulin
Method: EM (subtomogram averaging) / Resolution: 9.2 Å

EMDB-73643: The Kaggle CryoET Object Identification Challenge: first place thyroglobulin
Method: EM (subtomogram averaging) / Resolution: 8.2 Å

Source
  • Homo sapiens (human)

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