[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 618 items for (author: liao & z)

EMDB-47570:
DH726-1 Fab bound to hemagglutinin from influenza A/Solomon Islands/3/2006
Method: single particle / : Finney J, Harrison SC, Walsh Jr RM, Kelsoe G

EMDB-63181:
Cryo-EM map of C1ql1-gC1q hexamer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

EMDB-63182:
Focused map of C1ql1-gC1q trimer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

PDB-9lkl:
Cryo-EM map of C1ql1-gC1q hexamer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

PDB-9lkm:
Focused map of C1ql1-gC1q trimer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

EMDB-70396:
S. griseus TUA bound UmbA4 complexes
Method: helical / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

PDB-9oee:
S. griseus TUA bound UmbA4 complexes
Method: helical / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

EMDB-73973:
Streptomyces coelicolor UmbA4 complex
Method: single particle / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Mougous JD, Veesler D

EMDB-65457:
Pre-initiation complex class 1 with eIF4A of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65458:
80S ribosome of HeLa cells treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65459:
80S ribosome class 1 with eEF1A,A/T,P in unrotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65460:
80S ribosome class 2 with eEF2 in unrotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65461:
Pre-initiation complex class 2 with eIF4A and eIF4G of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65462:
80S ribosome class 3 with eEF2,Z-tRNA in unrotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65463:
Pre-initiation complex of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65464:
80S ribosome class 4 with eEF1A,A/T in unrotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65465:
80S ribosome class 5 with E-tRNA in unrotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65466:
80S ribosome class 6 with eEF1A,A/T,E in unrotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65467:
80S ribosome class 7 with eEF2,eIF5A in rotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65468:
80S ribosome class 8 with eEF2,Z-tRNA in rotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65469:
80S ribosome class 9 with eEF2,E-tRNA in rotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65470:
80S ribosome class 10 with eEF2 in rotated state of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65471:
40S ribosome subunit of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65472:
40S ribosome subunit class 1 with eIF1A of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65473:
40S ribosome subunit class 2 with eIF1A,eIF1 of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-65474:
Pre-initiation complex class 3 of HeLa cell treated by sodium arsenite
Method: subtomogram averaging / : Yichun W, Xing W

EMDB-60989:
Class 2 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

EMDB-61520:
Class 3 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

EMDB-61522:
Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

PDB-9jj9:
Class 3 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

PDB-9jjb:
Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

EMDB-39984:
Cryo-EM structure of Mycobacteriophage Douge genome-packed vertex (gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39990:
Cryo-EM structure of Mycobacteriophage Douge genome-free vertex (gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

PDB-8zdk:
Cryo-EM structure of Mycobacteriophage Douge genome-packed vertex (gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

PDB-8zdm:
Cryo-EM structure of Mycobacteriophage Douge genome-free vertex (gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-62577:
Cryo-EM structure of HsClpP bound to CLPP-2068
Method: single particle / : Zhao H, Yuan Q, Yin W

PDB-9kuf:
Cryo-EM structure of HsClpP bound to CLPP-2068
Method: single particle / : Zhao H, Yuan Q, Yin W

EMDB-60714:
Cryo-EM structure of Mycobacteriophage Douge genome-packed connector-vertex (gp5, gp8, gp9, gp10, gp12, gp13 and gp113
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-60715:
Cryo-EM structure of Mycobacteriophage Douge genome-free connector vertex (gp5, gp8, gp9, gp10, gp12 and gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-63235:
An antibody target the fusion protein of Nipah virus
Method: single particle / : Xu H, Su XD

PDB-9lng:
An antibody target the fusion protein of Nipah virus
Method: single particle / : Xu H, Su XD

EMDB-39973:
Cryo-EM structure of Mycobacteriophage Douge genome-packed capsid (gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39974:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed capsid (Penton region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39975:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed capsid (P-hexon region: gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39976:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed capsid (C-hexon region: gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39977:
Composite cryo-EM map of Mycobacteriophage Douge genome-packed capsid (Penton, P-hexon and C-hexon region: gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39978:
Cryo-EM structure of Mycobacteriophage Douge genome-free capsid (gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39979:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free capsid (Penton region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39980:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free capsid (P-hexon region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39981:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free capsid (C-hexon region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more