[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 173 items for (author: leitner & a)

EMDB-51375:
BCL7A and BAF47 in a nucleosome bound state
Method: single particle / : Martin F, Bergamin E

EMDB-51376:
BCL7A and BAF47 in a nucleosome bound state
Method: single particle / : Martin F, Bergamin E

EMDB-52975:
Structure of the nucleosome-bound human BCL7A
Method: single particle / : Martin F, Bergamin E

PDB-9qaj:
Structure of the nucleosome-bound human BCL7A
Method: single particle / : Martin F, Bergamin E

EMDB-19150:
Cryo-EM map of the 20S proteasome in complex with the bacterial proteasome activator Bpa from M. tuberculosis
Method: single particle / : Zdanowicz R, von Rosen T, Afanasyev P, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-19151:
20S proteasome from M. tuberculosis
Method: single particle / : Zdanowicz R, von Rosen T, Afanasyev P, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-19153:
M. tuberculosis bacterial proteasome activator Bpa with bound substrate
Method: single particle / : Zdanowicz R, von Rosen T, Afanasyev P, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-19159:
truncated M. tuberculosis bacterial proteasome activator Bpa
Method: single particle / : Zdanowicz R, von Rosen T, Afanasyev P, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-19162:
Cryo-EM structure of the Bacterial Proteasome Activator Bpa of Mycobacterium tuberculosis
Method: single particle / : Zdanowicz R, von Rosen T, Afanasyev P, Boehringer D, Glockshuber R, Weber-Ban E

PDB-8rgx:
Cryo-EM structure of the Bacterial Proteasome Activator Bpa of Mycobacterium tuberculosis
Method: single particle / : Zdanowicz R, von Rosen T, Afanasyev P, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-17127:
Cryo-EM structure of human tRNA ligase RTCB in complex with human PYROXD1.
Method: single particle / : Loeff L, Kroupova A, Asanovic I, Boneberg F, Pfleiderer MM, Ferdigg A, Ackle F, Martinez J, Jinek M

PDB-8orj:
Cryo-EM structure of human tRNA ligase RTCB in complex with human PYROXD1.
Method: single particle / : Loeff L, Kroupova A, Asanovic I, Boneberg F, Pfleiderer MM, Ferdigg A, Ackle F, Martinez J, Jinek M

EMDB-19078:
Saccharomyces cerevisiae Prp43 helicase in complex with Pxr1
Method: single particle / : Rabl J, Portugal Calisto D, Panse VG

PDB-8rdy:
Saccharomyces cerevisiae Prp43 helicase in complex with Pxr1
Method: single particle / : Rabl J, Portugal Calisto D, Panse VG

EMDB-17691:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex (icosahedral symmetry)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-17694:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex (tetrahedral symmetry)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-18616:
E2/E3BP core of the human pyruvate dehydrogenase complex (map 1; 3.4 A)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-18617:
E2/E3BP core of the human pyruvate dehydrogenase complex (map 2; 3.7 A)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

PDB-8piu:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-35122:
Human TRiC-PhLP2A complex in the closed state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

EMDB-35199:
The focused refinement of CCT3-PhLP2A from TRiC-PhLP2A complex in the open state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

PDB-8i1u:
Human TRiC-PhLP2A complex in the closed state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

PDB-8i6j:
The focused refinement of CCT3-PhLP2A from TRiC-PhLP2A complex in the open state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

EMDB-16255:
Focus refinement of soluble domain of Adenylyl cyclase 8 bound to stimulatory G protein, Forskolin, ATPalphaS, and Ca2+/Calmodulin in lipid nanodisc conditions
Method: single particle / : Khanppnavar B, Korkhov VM

PDB-8bv5:
Focus refinement of soluble domain of Adenylyl cyclase 8 bound to stimulatory G protein, Forskolin, ATPalphaS, and Ca2+/Calmodulin in lipid nanodisc conditions
Method: single particle / : Khanppnavar B, Korkhov VM

EMDB-35284:
Human TRiC-PhLP2A complex in the open state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

PDB-8i9u:
Human TRiC-PhLP2A complex in the open state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

EMDB-35280:
The focused refinement of CCT4-PhLP2A from TRiC-PhLP2A complex in the open state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

EMDB-35335:
Human TRiC-PhLP2A-actin complex in the closed state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

PDB-8i9q:
The focused refinement of CCT4-PhLP2A from TRiC-PhLP2A complex in the open state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

PDB-8ib8:
Human TRiC-PhLP2A-actin complex in the closed state
Method: single particle / : Roh SH, Park J, Kim H, Lim S

EMDB-16249:
Structure of Adenylyl cyclase 8 bound to stimulatory G protein, Forskolin, ATPalphaS, and Ca2+/Calmodulin in lipid nanodisc
Method: single particle / : Khanppnavar B, Korkhov VM

EMDB-16252:
Structure of Adenylyl cyclase 8 bound to stimulatory G-protein, Ca2+/Calmodulin, Forskolin and MANT-GTP
Method: single particle / : Khanppnavar B, Korkhov VM, Mehta V

EMDB-16253:
Focused refinement of soluble domain of Adenylyl cyclase 8 bound to stimulatory G-protein, Ca2+/Calmodulin, Forskolin and MANT-GTP
Method: single particle / : Khanppnavar B, Korkhov VM, Mehta V

EMDB-16254:
Focused refinement of transmembrane domain of Adenylyl cyclase 8 bound to stimulatory G-protein, Ca2+/Calmodulin, Forskolin and MANT-GTP
Method: single particle / : Khanppnavar B, Korkhov VM, Mehta V

PDB-8buz:
Structure of Adenylyl cyclase 8 bound to stimulatory G-protein, Ca2+/Calmodulin, Forskolin and MANT-GTP
Method: single particle / : Khanppnavar B, Korkhov VM, Mehta V

EMDB-17464:
EM structure of endogenous TREX complex from S. cerevisiae
Method: single particle / : Kern C, Straesser K

EMDB-15089:
Sodium pumping NADH-quinone oxidoreductase with substrates NADH and Q2
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

PDB-8a1u:
Sodium pumping NADH-quinone oxidoreductase with substrates NADH and Q2
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

EMDB-15088:
Sodium pumping NADH-quinone oxidoreductase
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

EMDB-15090:
Sodium pumping NADH-quinone oxidoreductase with substrate Q2
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

EMDB-15091:
Sodium pumping NADH-quinone oxidoreductase with substrate Q1
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

EMDB-15092:
Sodium pumping NADH-quinone oxidoreductase with inhibitor DQA
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

EMDB-15093:
Sodium pumping NADH-quinone oxidoreductase with inhibitor HQNO
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

PDB-8a1t:
Sodium pumping NADH-quinone oxidoreductase
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

PDB-8a1v:
Sodium pumping NADH-quinone oxidoreductase with substrate Q2
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

PDB-8a1w:
Sodium pumping NADH-quinone oxidoreductase with substrate Q1
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

PDB-8a1x:
Sodium pumping NADH-quinone oxidoreductase with inhibitor DQA
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

PDB-8a1y:
Sodium pumping NADH-quinone oxidoreductase with inhibitor HQNO
Method: single particle / : Hau JL, Kaltwasser S, Vonck J, Fritz G, Steuber J

EMDB-16264:
Cryo-EM structure of the Hfq-Crc-amiE translation repression assembly.
Method: single particle / : Dendooven T, Luisi BF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more