[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,252 items for (author: lei & l)

EMDB-19134:
Cryo-EM structure of nucleosome containing Widom603 DNA
Method: single particle / : Motorin NA, Afonin D, Armeev GA, Moiseenko A, Zhao L, Vasiliev V, Oleinikov P, Shaytan A, Shi X, Studitsky V, Sokolova O

EMDB-19169:
Cryo-EM structure of hexasome containing Widom601 DNA
Method: single particle / : Motorin NA, Afonin D, Armeev GA, Moiseenko A, Zhao L, Vasiliev V, Oleinikov P, Shaytan A, Shi X, Studitsky V, Sokolova O

EMDB-19170:
Cryo-EM structure of nucleosome containing Widom601 DNA
Method: single particle / : Motorin NA, Afonin D, Armeev GA, Moiseenko A, Zhao L, Vasiliev V, Oleinikov P, Shaytan A, Shi X, Studitsky V, Sokolova O

PDB-8rgm:
Cryo-EM structure of nucleosome containing Widom603 DNA
Method: single particle / : Motorin NA, Afonin D, Armeev GA, Moiseenko A, Zhao L, Vasiliev V, Oleinikov P, Shaytan A, Shi X, Studitsky V, Sokolova O

EMDB-60383:
Anaerobically isolated active [FeFe]-hydrogenase CbA5H
Method: single particle / : Kawamoto A, Kurisu G

EMDB-19967:
Cryo-electron microscopy structure of the Chaetomium thermofilum Uba4-Urm1 complex
Method: single particle / : Kwasna D, Sokolowski M, Jaciuk M, Glatt S

EMDB-39750:
The structure of type III CRISPR-associated deaminase in complex cA6 and ATP, fully activated
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39752:
The structure of type III CRISPR-associated deaminase in complex cA4
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39945:
Focused map for area 1 of type III CRISPR-associated deaminase in complex cA4
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39951:
Raw consensus map of type III CRISPR-associated deaminase in complex cA4
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39952:
Focused map for area 2 of type III CRISPR-associated deaminase in complex cA4
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39953:
Focused map for area 3 of type III CRISPR-associated deaminase in complex cA4
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39955:
Focused map for area 1 of type III CRISPR-associated deaminase in complex cA6 and ATP
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39965:
Focused map for area 2 of type III CRISPR-associated deaminase in complex cA6 and ATP, fully activated
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39966:
Focused map for area 3 of type III CRISPR-associated deaminase in complex cA6 and ATP, fully activated
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-60045:
Raw consensus map of type III CRISPR-associated deaminase in complex cA6 and ATP, fully activated
Method: single particle / : Chen MR, Li ZX, Xiao YB

PDB-8z3p:
The structure of type III CRISPR-associated deaminase in complex cA6 and ATP, fully activated
Method: single particle / : Chen MR, Li ZX, Xiao YB

PDB-8z3r:
The structure of type III CRISPR-associated deaminase in complex cA4
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-44442:
Dimeric form of LDL, LDL receptor and Legobody
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

EMDB-44443:
beta/alpha1 region of ApoB 100
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

EMDB-44446:
ApoB 100 beta barrel bound to LDLR beta propeller
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

EMDB-44450:
Middle Region of Apolipoprotein B 100 bound to Low Density Lipoprotein Receptor
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

EMDB-44469:
Apolipoprotein B 100 bound to LDL receptor and legobody
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

EMDB-45787:
Nanobody 4 bound to Apolipoprotein B 100
Method: single particle / : Dearborn AD, Kumar A, Reimund M, Graziano G, Lei H, Neufeld EB, Remaley AT, Marcotrigiano J

PDB-9bd1:
beta/alpha1 region of ApoB 100
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

PDB-9bd8:
ApoB 100 beta barrel bound to LDLR beta propeller
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

PDB-9bde:
Middle Region of Apolipoprotein B 100 bound to Low Density Lipoprotein Receptor
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

PDB-9bdt:
Apolipoprotein B 100 bound to LDL receptor and legobody
Method: single particle / : Dearborn AD, Reimund M, Graziano G, Lei H, Kumar A, Neufeld EB, Remaley AT, Marcotrigiano J

PDB-9coo:
Nanobody 4 bound to Apolipoprotein B 100
Method: single particle / : Dearborn AD, Kumar A, Reimund M, Graziano G, Lei H, Neufeld EB, Remaley AT, Marcotrigiano J

EMDB-39291:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in pyraclostrobin-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-39323:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in YF23694-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60256:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in Metyltetraprole-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60317:
Cryo-EM structure of pyraclostrobin-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Li ZW, Cui GR, Yang GF

EMDB-60320:
Cryo-EM structure of Metyltetraprole-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-60323:
Cryo-EM structure of YF23694-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

PDB-8yhq:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in pyraclostrobin-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

PDB-8yin:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in YF23694-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

PDB-8zmt:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in Metyltetraprole-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

PDB-8zos:
Cryo-EM structure of pyraclostrobin-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Li ZW, Cui GR, Yang GF

PDB-8zow:
Cryo-EM structure of Metyltetraprole-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

PDB-8zp0:
Cryo-EM structure of YF23694-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-60038:
The composite map of E. coli BrxX methyltransferase in complex with Ocr resolved by cryo-EM
Method: single particle / : Zhu L, Xu TH, Sun LT

EMDB-62670:
Local refinement map of the NTD and MTD regions of BrxX in the BrxX-Ocr complex
Method: single particle / : Zhu L, Xu TH, Sun LT

EMDB-62678:
Local refinement map of the TRD and CTD regions of BrxX and two Ocr molecules in the BrxX-Ocr complex
Method: single particle / : Zhu L, Xu TH, Sun LT

EMDB-45459:
Structure of in vitro assembled B. anthracis S-layer protein Sap
Method: subtomogram averaging / : Leigh KE, Van der Verren SE, Remaut H, Kudryashev M

PDB-9g93:
CryoET structure of the in vitro grown Bacillus anthracis Sap S-layer
Method: subtomogram averaging / : Sogues A, Leigh K, Van der Verren S, Kudryashev M, Pak A, Halingstad EV, Cecil AJ, Fioravanti A, Remaut H

EMDB-45055:
Pannexin 1 lacking C-terminal activating domain
Method: single particle / : Ehrlich JJ, Kawate T

PDB-9bz7:
Pannexin 1 lacking C-terminal activating domain
Method: single particle / : Ehrlich JJ, Kawate T

EMDB-39746:
The structure of type III CRISPR-associated deaminase in complex 2cA6 and 2ATP, partial activated
Method: single particle / : Chen MR, Li ZX, Xiao YB

EMDB-39759:
The structure of type III CRISPR-associated deaminase apo form
Method: single particle / : Chen MR, Li ZX, Xiao YB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more