[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,264 items for (author: lee & hn)

EMDB-77146:
Focused refinement of turnover filament interface of glutamine synthetase
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-70605:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Single Particle CryoEM Map with Icosahedral Symmetry Applied
Method: single particle / : DiMaio F, Weidle C

EMDB-70685:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied
Method: subtomogram averaging / : DiMaio F, Chmielewski D, Weidle C

PDB-9om3:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Single Particle CryoEM Map with Icosahedral Symmetry Applied
Method: single particle / : DiMaio F, Weidle C

PDB-9op9:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied
Method: subtomogram averaging / : DiMaio F, Chmielewski D, Weidle C

EMDB-71658:
Cryo-EM structure of the PGD2-bound prostaglandin D2 receptor (DP1)-Gs complex (Consensus map)
Method: single particle / : Davoudinasab B, Cherezov V, Han GW, Kim D

EMDB-71659:
Cryo-EM structure of the PGD2-bound prostaglandin D2 receptor (DP1)-Gs complex (Receptor-focused map)
Method: single particle / : Davoudinasab B, Cherezov V, Han GW, Kim D

EMDB-71660:
Cryo-EM structure of the PGD2-bound prostaglandin D2 receptor (DP1)-Gs complex (G protein-focused map)
Method: single particle / : Davoudinasab B, Cherezov V, Han GW, Kim D

EMDB-71661:
Cryo-EM structure of the BW245C-bound prostaglandin D2 receptor (DP1)-Gs complex (Consensus map)
Method: single particle / : Davoudinasab B, Cherezov V, Han GW, Kim D

EMDB-71662:
Cryo-EM structure of the BW245C-bound prostaglandin D2 receptor (DP1)-Gs complex (Receptor-focused map)
Method: single particle / : Davoudinasab B, Cherezov V, Han GW, kim D

EMDB-71663:
Cryo-EM structure of the BW245C-bound prostaglandin D2 receptor (DP1)-Gs complex (G protein-focused map)
Method: single particle / : Davoudinasab B, Cherezov V, Han GW

EMDB-72377:
Staphylococcal Enterotoxin C in complex with NB C107 and NB C112
Method: single particle / : Hang W, Kim J, Taylor DJ, Shi Y

PDB-9xzx:
Staphylococcal Enterotoxin C in complex with NB C107 and NB C112
Method: single particle / : Hang W, Kim J, Taylor DJ, Shi Y

EMDB-73693:
Structure of human lymphoid-specific helicase HELLS in its auto-inhibitory state
Method: single particle / : Kaur G, Horton JR, Cheng X

EMDB-73694:
Structure of human lymphoid-specific helicase HELLS in its auto-inhibitory state
Method: single particle / : Kaur G, Horton JR, Cheng X

EMDB-73695:
Structure of human lymphoid-specific helicase HELLS in its auto-inhibitory state
Method: single particle / : Kaur G, Horton JR, Cheng X

EMDB-73696:
Structure of human lymphoid-specific helicase HELLS in its auto-inhibitory state
Method: single particle / : Kaur G, Horton JR, Cheng X

EMDB-73697:
Focussed refinement map of ATPase lobe 2 of human lymphoid-specific helicase HELLS
Method: single particle / : Kaur G, Horton JR, Cheng X

PDB-9z04:
Structure of human lymphoid-specific helicase HELLS in its auto-inhibitory state
Method: single particle / : Kaur G, Horton JR, Cheng X

PDB-9z05:
Structure of human lymphoid-specific helicase HELLS in its auto-inhibitory state (D3)
Method: single particle / : Kaur G, Horton JR, Cheng X

PDB-9z06:
Structure of human lymphoid-specific helicase HELLS in its auto-inhibitory state
Method: single particle / : Kaur G, Horton JR, Cheng X

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-72508:
BS3-crosslinked Smoothened/PKA-C complex
Method: single particle / : Liu G, Myers BR

EMDB-74330:
SMO/PKA-C complex, mixed prior to grid preparation
Method: single particle / : Liu G, Myers BR

EMDB-74331:
SMO/PKA-C complex in MSP1E3D1 nanodiscs
Method: single particle / : Liu G, Myers BR

EMDB-74332:
Disulfide-trapped SMO-L637C/PKA-C complex
Method: single particle / : Liu G, Myers BR

EMDB-74333:
EDC/Sulfo-NHS-crosslinked SMO/PKA-C complex
Method: single particle / : Liu G, Myers BR

EMDB-74334:
SMO/PKA-C complex, dual EDC/Sulfo-NHS and BS3 crosslinking
Method: single particle / : Liu G, Myers BR

EMDB-49511:
CH35 V1V2V3 and gp41-base macaque polyclonal Fabs in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49512:
CH35 gp41-FP macaque polyclonal Fab in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49513:
CH70 gp41-GH macaque polyclonal Fab in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49865:
Cryo-EM structure of V2 apex germline-targeting HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49866:
Cryo-EM structure of rhesus antibody CH35-Apex1.08 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49867:
Cryo-EM structure of rhesus antibody CI91-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49868:
Cryo-EM structure of rhesus antibody CH70-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49869:
Cryo-EM structure of rhesus antibody CH70-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49870:
Cryo-EM structure of rhesus antibody CH42-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49871:
Cryo-EM structure of rhesus antibody CH42-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvv:
Cryo-EM structure of V2 apex germline-targeting HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvw:
Cryo-EM structure of rhesus antibody CH35-Apex1.08 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvx:
Cryo-EM structure of rhesus antibody CI91-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvy:
Cryo-EM structure of rhesus antibody CH70-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvz:
Cryo-EM structure of rhesus antibody CH70-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nw0:
Cryo-EM structure of rhesus antibody CH42-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nw1:
Cryo-EM structure of rhesus antibody CH42-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9pit:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9piv:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more