[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 933 items for (author: lai & q)

EMDB-73866:
Raw consensus map of rEatAp complexed with Fab G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73867:
Constituent EM map: local refinement of putative MUC2 binding domain of rEatAp and Fv domain of Fab G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73868:
Constituent EM map: local refinement of putative MUC2 binding domain of rEatAp and Fab G12 from best Fab-containing 2D classes
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73869:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 25
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73870:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73871:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 15
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73872:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73873:
Cryo-EM structure of Secreted extracellular protein A (SepA) from Shigella flexneri complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73874:
Cryo-EM structure of Protein involved in colonization (Pic) from Enteroaggregative Escherichia coli complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-69608:
Structure of the PADI6 dimer
Method: single particle / : Liu Q, Gui M

EMDB-69633:
Structure of the PADI6 tetramer assembled from two dimers
Method: single particle / : Liu Q, Gui M

EMDB-69635:
Structure of the PADI6 hexamer assembled from three dimers
Method: single particle / : Liu Q, Gui M

EMDB-69637:
Structure of the PADI6 octamer assembled from four dimers
Method: single particle / : Liu Q, Gui M

EMDB-69638:
Structure of the PADI6 decamer assembled from five dimers
Method: single particle / : Liu Q, Gui M

EMDB-69639:
Structure of the PADI6 filament
Method: single particle / : Liu Q, Gui M

EMDB-54176:
CryoEM structure of the spike S protein trimer of the omicron BA.1 variant prepared in the presence of compound II-Na salt
Method: single particle / : Llacer JL, Lopez ML

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-63033:
Cryo-EM structure of human ZAC in zinc Binding State
Method: single particle / : Qu Q, Zhou Z

EMDB-63034:
Cryo-EM structure of human ZAC with A152 mutant in zinc binding state
Method: single particle / : Qu Q, Zhou Z

EMDB-63035:
Cryo-EM structure of human ZAC in nanodisc in apo state
Method: single particle / : Qu Q, Zhou Z

EMDB-63036:
Cryo-EM structure of human ZAC in zinc partially binding state in nanodisc
Method: single particle / : Qu Q, Zhou Z

EMDB-63037:
Cryo-EM structure of human ZAC in complex with d-tubocurarine
Method: single particle / : Qu Q, Zhou Z

EMDB-63038:
Cryo-EM structure of human ZAC in complex with N-(4-(tert-butyl)thiazol-2-yl)-3-fluorobenzamide (TTFB)
Method: single particle / : Qu Q, Zhou Z

PDB-9let:
Cryo-EM structure of human ZAC in zinc Binding State
Method: single particle / : Qu Q, Zhou Z

PDB-9leu:
Cryo-EM structure of human ZAC with A152 mutant in zinc binding state
Method: single particle / : Qu Q, Zhou Z

PDB-9lev:
Cryo-EM structure of human ZAC in nanodisc in apo state
Method: single particle / : Qu Q, Zhou Z

PDB-9lex:
Cryo-EM structure of human ZAC in zinc partially binding state in nanodisc
Method: single particle / : Qu Q, Zhou Z

PDB-9ley:
Cryo-EM structure of human ZAC in complex with d-tubocurarine
Method: single particle / : Qu Q, Zhou Z

PDB-9lez:
Cryo-EM structure of human ZAC in complex with N-(4-(tert-butyl)thiazol-2-yl)-3-fluorobenzamide (TTFB)
Method: single particle / : Qu Q, Zhou Z

EMDB-70071:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to fluornitrazene (FNZ)
Method: single particle / : Robertson MJ, Skiniotis G

PDB-9o36:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to fluornitrazene (FNZ)
Method: single particle / : Robertson MJ, Skiniotis G

EMDB-75112:
SK3D-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75120:
OX1-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75121:
SK5A-Matured apo state in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75122:
SK5B-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75123:
SK3D-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75127:
SK5G-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75128:
OX1-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75129:
SK5A-Matured glycine/glutamate in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75134:
SK5G-Germline
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75136:
SK5A-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75138:
SK5B-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10en:
SK3D-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ev:
OX1-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ex:
SK5A-Matured apo state in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ey:
SK5B-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ez:
SK3D-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10fd:
SK5G-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10fe:
OX1-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more