[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 45 items for (author: koziej & l)

EMDB-19938:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with water molecules at 1.94 A resolution
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

EMDB-19939:
Cryo-EM structure of Spinacia oleracea cytochrome b6f with decylplastoquinone bound at plastoquionol reduction site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

EMDB-19940:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with inhibitor DBMIB bound at plastoquinol oxidation site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

PDB-9es7:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with water molecules at 1.94 A resolution
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

PDB-9es8:
Cryo-EM structure of Spinacia oleracea cytochrome b6f with decylplastoquinone bound at plastoquionol reduction site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

PDB-9es9:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with inhibitor DBMIB bound at plastoquinol oxidation site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

EMDB-16917:
Human apo pseudouridine synthase 3 (PUS3)
Method: single particle / : Lin TY, Glatt S, Koziej L

EMDB-16926:
Human pseudouridine synthase 3 and tRNA-Gln
Method: single particle / : Lin TY, Glatt S

EMDB-19830:
Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19831:
Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19832:
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two tRNA-Arg
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19833:
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two pre-tRNA-Arg
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19834:
Human pseudouridine synthase 3 (PUS3 R116A mutant)
Method: single particle / : Lin TY, Glatt S

EMDB-19835:
Human pseudouridine synthase 3 (PUS3 K119A mutant)
Method: single particle / : Lin TY, Glatt S

EMDB-19836:
Human pseudouridine synthase 3 (wild type)
Method: single particle / : Lin TY, Glatt S

PDB-8okd:
Human pseudouridine synthase 3 and tRNA-Gln
Method: single particle / : Lin TY, Glatt S

PDB-9enb:
Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln
Method: single particle / : Lin TY, Jezowski J, Glatt S

PDB-9enc:
Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln
Method: single particle / : Lin TY, Jezowski J, Glatt S

PDB-9ene:
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two tRNA-Arg
Method: single particle / : Lin TY, Jezowski J, Glatt S

PDB-9enf:
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two pre-tRNA-Arg
Method: single particle / : Lin TY, Jezowski J, Glatt S

PDB-9f9q:
Human apo pseudouridine synthase 3 (PUS3 D118A mutant)
Method: single particle / : Lin TY, Glatt S

EMDB-16015:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

EMDB-16029:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

EMDB-16031:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

EMDB-16047:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

EMDB-16057:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

EMDB-16059:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

EMDB-16062:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

EMDB-16065:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

EMDB-16081:
Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.
Method: single particle / : Koziej L, Glatt S

EMDB-16082:
Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
Method: single particle / : Koziej L, Glatt S

PDB-8bf7:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

PDB-8bge:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

PDB-8bgh:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

PDB-8bh4:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

PDB-8bhj:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

PDB-8bhl:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

PDB-8bhn:
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Method: single particle / : Koziej L, Glatt S

PDB-8bhp:
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
Method: single particle / : Koziej L, Glatt S

PDB-8bil:
Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.
Method: single particle / : Koziej L, Glatt S

PDB-8bim:
Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
Method: single particle / : Koziej L, Glatt S

EMDB-14123:
Cryo-EM structure of catalytically active Spinacia oleracea cytochrome b6f in complex with endogenous plastoquinones at 2.7 A resolution
Method: single particle / : Sarewicz M, Szwalec M, Indyka P, Rawski M, Pintscher S, Pietras R, Mielecki B, Jaciuk M, Glatt S, Osyczka A

EMDB-15027:
Cryo-EM structure of catalytically active Spinacia oleracea cytochrome b6f in complex with endogenous plastoquinones at 2.13 A resolution
Method: single particle / : Sarewicz M, Szwalec M, Pintscher S, Indyka P, Rawski M, Pietras R, Mielecki B, Koziej L, Jaciuk M, Glatt S, Osyczka A

PDB-7qrm:
Cryo-EM structure of catalytically active Spinacia oleracea cytochrome b6f in complex with endogenous plastoquinones at 2.7 A resolution
Method: single particle / : Sarewicz M, Szwalec M, Indyka P, Rawski M, Pintscher S, Pietras R, Mielecki B, Jaciuk M, Glatt S, Osyczka A

PDB-7zyv:
Cryo-EM structure of catalytically active Spinacia oleracea cytochrome b6f in complex with endogenous plastoquinones at 2.13 A resolution
Method: single particle / : Sarewicz M, Szwalec M, Pintscher S, Indyka P, Rawski M, Pietras R, Mielecki B, Koziej L, Jaciuk M, Glatt S, Osyczka A

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more