[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 830 items for (author: kong & l)

EMDB-65449:
Cyanopodophage Pan3 capsid
Method: single particle / : Hou P, Zhou CZ, Jiang YL

EMDB-65451:
Cyanopodophage Pan3 portal complex
Method: single particle / : Hou P, Zhou CZ, Jiang YL

EMDB-65452:
Cyanopodophage Pan3 tail complex
Method: single particle / : Hou P, Zhou CZ, Jiang YL

EMDB-65453:
Cyanopodophage Pan3 tailspike
Method: single particle / : Hou P, Zhou CZ, Jiang YL

PDB-9vye:
Cyanopodophage Pan3 capsid
Method: single particle / : Hou P, Zhou CZ, Jiang YL

PDB-9vyf:
Cyanopodophage Pan3 portal complex
Method: single particle / : Hou P, Zhou CZ, Jiang YL

PDB-9vyg:
Cyanopodophage Pan3 tail complex
Method: single particle / : Hou P, Zhou CZ, Jiang YL

PDB-9vyh:
Cyanopodophage Pan3 tailspike
Method: single particle / : Hou P, Zhou CZ, Jiang YL

EMDB-60393:
Cryo-EM structure of AbCapV filemant bound with 3',3'-cGAMP with extra phospholipid density
Method: single particle / : Kong JP, Li ZX, Ke SY, Xiao YB

EMDB-61417:
Cryo-EM structure of AbCapV dimer, apo form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

EMDB-61419:
Cryo-EM structure of AbCapV tetramer, intermediate form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

PDB-8zr9:
Cryo-EM structure of AbCapV filemant bound with 3',3'-cGAMP
Method: single particle / : Kong JP, Li ZX, Ke SY, Xiao YB

PDB-9jeh:
Cryo-EM structure of AbCapV dimer, apo form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

PDB-9jek:
Cryo-EM structure of AbCapV tetramer, intermediate form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

EMDB-62291:
Cryo-EM structure of AbCapV S58A filament bound with 3'3'-cGAMP with extra phospholipid density
Method: single particle / : Kong JP, Li ZX, Wu WQ, Xiao YB

PDB-9kej:
Cryo-EM structure of AbCapV S58A filament bound with 3'3'-cGAMP
Method: single particle / : Kong JP, Li ZX, Wu WQ, Xiao YB

EMDB-62800:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with Ace2 constituent map 1
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-62810:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with ACE2 constituent map 2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-60985:
vertex region local refined map of Bax line
Method: single particle / : Zhang Y, Tian T, Ge X, Huang G, Shi Y

EMDB-60988:
arm region local refined map of Bax line
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-63417:
IAA-bound AUX1
Method: single particle / : Wang CC, Jing D, Kong F, Huang GXY, Shi YG

EMDB-63418:
IAA-free AUX1
Method: single particle / : Jing D, Kong F, Wang CC, Shi YG, Huang GXY

PDB-9lva:
IAA-bound AUX1
Method: single particle / : Wang CC, Jing D, Kong F, Huang GXY, Shi YG

PDB-9lvb:
IAA-free AUX1
Method: single particle / : Jing D, Kong F, Wang CC, Shi YG, Huang GXY

EMDB-61005:
Tetragon ring reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61007:
Pentagon reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61010:
Hexagon reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61017:
Heptagonal reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61020:
tetragon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61021:
Pentagon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61022:
Hexagon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61023:
Heptagon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-71068:
Reconstruction of the yeast 60S ribosomal subunit from CEMOVIS sections
Method: single particle / : Elferich J, Kaminek M, Kong L, Odriozola A, Kukulski W, Zuber B, Grigorieff N

EMDB-60977:
Overall reconstruction of the Bax line
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

PDB-9ixu:
Overall reconstruction of the Bax line
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61473:
Activation mechanism of CYSLTR2 by C20:0
Method: single particle / : Wang JL, Sun JP, Yu X

PDB-9jh6:
Activation mechanism of CYSLTR2 by C20:0
Method: single particle / : Wang JL, Sun JP, Yu X

EMDB-61472:
Activation mechanism of CYSLTR2 by C16:0 ceramide
Method: single particle / : Wang JL, Ding JH, Sun JP, Yu X

PDB-9jh5:
Activation mechanism of CYSLTR2 by C16:0 ceramide
Method: single particle / : Wang JL, Ding JH, Sun JP, Yu X

EMDB-60599:
SARS-CoV-2 spike (Wuhan-Hu-1) in the closed conformation induced by Ad5-nCoV vaccine
Method: subtomogram averaging / : Dong D, Song Y, Li S

EMDB-60600:
SARS-CoV-2 spike (Wuhan-Hu-1) in the One-RBD-up conformation induced by Ad5-nCoV vaccine
Method: subtomogram averaging / : Dong D, Song Y, Li S

EMDB-60601:
SARS-CoV-2 spike (Omicron) in the closed conformation induced by Ad5-nCoV vaccine
Method: subtomogram averaging / : Dong D, Song Y, Li S

EMDB-60602:
SARS-CoV-2 spike (Omicron) in the One-RBD-up conformation induced by Ad5-nCoV vaccine
Method: subtomogram averaging / : Dong D, Song Y, Li S

EMDB-61484:
Cryo-EM structure of the C18:0 ceramide-bound FPR2-Gi complex
Method: single particle / : Sun JP, Jiang CT, Kong W, Yu X, Cai K, Guo LL

PDB-9jhj:
Cryo-EM structure of the C18:0 ceramide-bound FPR2-Gi complex
Method: single particle / : Sun JP, Jiang CT, Kong W, Yu X, Cai K, Guo LL

EMDB-60981:
Human KCNQ2-CaM-Ebio2 Complex in the Presence of PIP2
Method: single particle / : Yang Z, Guo J

EMDB-60982:
human KCNQ2-CaM-Ebio3 Complex in the Presence of PIP2
Method: single particle / : Yang Z, Guo J

PDB-9ixy:
Human KCNQ2-CaM-Ebio2 Complex in the Presence of PIP2
Method: single particle / : Yang Z, Guo J

PDB-9ixz:
human KCNQ2-CaM-Ebio3 Complex in the Presence of PIP2
Method: single particle / : Yang Z, Guo J

EMDB-39946:
Cryo-EM structure of the xGPR4-Gs complex in pH6.2
Method: single particle / : Rong NK, Wen X, Yang F, Sun JP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more