[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 691 items for (author: king & h)

EMDB-67283:
C1 Symmetry of DNA tesseract
Method: single particle / : Shiu SCC

EMDB-67284:
Octahedral Symmetry of DNA Tesseract
Method: single particle / : Shiu SCC

EMDB-71751:
Cryo-ET reconstruction of a regenerating axon after axotomy showing branching microtubules (primary mouse thalamus neuronal explant, control)
Method: electron tomography / : Bodakuntla S, Taira K, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

EMDB-71752:
Cryo-ET reconstruction of a regenerating axon after axotomy showing branching microtubules (primary mouse thalamus neuronal explant)
Method: electron tomography / : Taira K, Bodakuntla S, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

EMDB-71753:
Cryo-ET reconstruction of a regenerating axon after axotomy showing polymerizing microtubules (primary mouse thalamus neuronal explant)
Method: electron tomography / : Bodakuntla S, Taira K, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

EMDB-71754:
Cryo-ET reconstruction of a regenerating axon 24 h after axotomy (primary mouse thalamus neuronal explant)
Method: electron tomography / : Bodakuntla S, Taira K, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

EMDB-71755:
Cryo-ET reconstruction of a regenerating axon 24 h after axotomy (primary mouse thalamus neuronal explant)
Method: electron tomography / : Bodakuntla S, Taira K, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

EMDB-71840:
Cryo-ET subtomogram averaging of a stress fiber from a regenerating axon
Method: subtomogram averaging / : Bodakuntla S, Taira K, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

EMDB-71750:
In situ microtubule of EpoB-induced regenerating axons
Method: helical / : Bodakuntla S, Taira K, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

PDB-9pnd:
In situ microtubule of EpoB-induced regenerating axons
Method: helical / : Bodakuntla S, Taira K, Yamada Y, Alvarez-Brecht P, Cada AK, Basnet N, Zhang R, Martinez-Sanchez A, Biertumpfel C, Mizuno N

EMDB-48271:
CryoEM Structure of Zaire Ebola Virus Envelope Glycoprotein GP
Method: single particle / : Weidle C, Borst AJ

EMDB-49275:
Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
Method: single particle / : Zdancewicz S, Jomaa A

PDB-9ndp:
Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
Method: single particle / : Zdancewicz S, Jomaa A

EMDB-70158:
In-situ structure of the injectisome of Shigella flexneri with needle from mxiG linker mutant with three EAAAR motifs
Method: subtomogram averaging / : Tachiyama S, Liu J

EMDB-70160:
In-situ structure of the injectisome of Shigella flexneri without needle from mxiG linker mutant with three EAAAR motifs
Method: subtomogram averaging / : Tachiyama S, Liu J

EMDB-70161:
In-situ structure of the injectisome of Shigella flexneri without needle from mxiG linker deletion mutant
Method: subtomogram averaging / : Tachiyama S, Liu J

EMDB-70162:
In-situ structure of the injectisome of Shigella flexneri with needle from mxiG linker deletion mutant
Method: subtomogram averaging / : Tachiyama S, Liu J

EMDB-70165:
In-situ structure of the injectisome of Shigella flexneri with needle from mxiG linker deletion 111-124 mutant
Method: subtomogram averaging / : Tachiyama S, Liu J

EMDB-70166:
In-situ structure of the injectisome of Shigella flexneri without needle from mxiG linker deletion 111-124 mutant
Method: subtomogram averaging / : Tachiyama S, Liu J

EMDB-48093:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

EMDB-48101:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

EMDB-48102:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

EMDB-70264:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

PDB-9eit:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

PDB-9eje:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

PDB-9ejf:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

PDB-9o9v:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

EMDB-70238:
(1-methylalkyl)succinate synthase alpha-beta-gamma-delta complex with bound fumarate
Method: single particle / : Andorfer MC, Drennan CL

PDB-9o8u:
(1-methylalkyl)succinate synthase alpha-beta-gamma-delta complex with bound fumarate
Method: single particle / : Andorfer MC, Drennan CL

EMDB-45734:
Novel designed icosahedral nanoparticle I3-A6
Method: single particle / : Haas CM, Jasti N, Dosey AM, Gillespie R, Allen JD, Leaf EM, Crispin M, DeForest C, Kanekiyo M, King NP

EMDB-45735:
Novel designed icosahedral nanoparticle I3-A7
Method: single particle / : Haas CM, Jasti N, Dosey AM, Gillespie R, McGowan J, Allen JD, Leaf EM, Crispin M, DeForest C, Kanekiyo M, King NP

PDB-9clz:
Novel designed icosahedral nanoparticle I3-A6
Method: single particle / : Haas CM, Jasti N, Dosey AM, Gillespie R, Allen JD, Leaf EM, Crispin M, DeForest C, Kanekiyo M, King NP

PDB-9cm0:
Novel designed icosahedral nanoparticle I3-A7
Method: single particle / : Haas CM, Jasti N, Dosey AM, Gillespie R, McGowan J, Allen JD, Leaf EM, Crispin M, DeForest C, Kanekiyo M, King NP

EMDB-53418:
Consensus cryo EM map of the human RalGAP2 complex
Method: single particle / : Rasche R, Klink BU, Gatsogiannis C, Kuemmel D

EMDB-53419:
Focussed cryo EM map from multibody refinement of human RalGAP2 complex (body1: alpha2 beta heterodimer interface)
Method: single particle / : Rasche R, Klink BU, Gatsogiannis C, Kuemmel D

EMDB-53420:
Focussed cryo EM map from multibody refinement of human RalGAP2 complex (body2: alpha2 N-terminus)
Method: single particle / : Rasche R, Klink BU, Gatsogiannis C, Kuemmel D

EMDB-53421:
Focussed cryo EM map from multibody refinement of human RalGAP2 complex (body3: beta-beta homodimer interface)
Method: single particle / : Rasche R, Klink BU, Gatsogiannis C, Kuemmel D

EMDB-53422:
Structure of the human RalGAP2 complex
Method: single particle / : Rasche R, Klink BU, Gatsogiannis C, Kuemmel D

PDB-9qwp:
Structure of the human RalGAP2 complex
Method: single particle / : Rasche R, Klink BU, Gatsogiannis C, Kuemmel D

EMDB-45736:
Novel designed icosahedral nanoparticle I3-D12
Method: single particle / : Haas CM, Jasti N, Dosey AM, Gillespie R, McGowan J, Allen JD, Leaf EM, Crispin M, DeForest C, Kanekiyo M, King NP

PDB-9cm1:
Novel designed icosahedral nanoparticle I3-D12
Method: single particle / : Haas CM, Jasti N, Dosey AM, Gillespie R, McGowan J, Allen JD, Leaf EM, Crispin M, DeForest C, Kanekiyo M, King NP

EMDB-46708:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. Complex of fAPN with FCoV-23 RBD
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46709:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S short
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46710:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S Do in proximal conformation (local refinement)
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46714:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S long with Do in swung-out conformation
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46716:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S long domain 0 in swung-out conformation (local refinement)
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46739:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S long with Do in mixed conformations (global refinement).
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9daz:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. Complex of fAPN with FCoV-23 RBD
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9db0:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S short
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9db1:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S Do in proximal conformation (local refinement)
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more