[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 431 items for (author: khan & ya)

EMDB-72014:
Latent-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72011:
Engaged-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72016:
Latent-state naloxone-mu opioid receptor-Gi GDP complex (constant GDP) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72018:
Engaged-state naloxone-mu opioid receptor-Gi GDP complex (constant GDP) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72020:
Open-AHD naloxone-mu opioid receptor-Gi GDP complex (constant GDP) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72028:
Open-AHD loperamide-mu opioid receptor-Gi GDP complex (constant GDP) - Locally refined Gi map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-74113:
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-74114:
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

PDB-9zen:
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

PDB-9zeo:
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-48638:
Structure of Human SLC33A1 in complex with oxidized glutathione
Method: single particle / : Gad M, Hite RK

PDB-9mun:
Structure of Human SLC33A1 in complex with oxidized glutathione
Method: single particle / : Gad M, Hite RK

EMDB-48699:
Consensus reconstitution of SLC33A1 in complex with a Fv clasp
Method: single particle / : Gad M, Hite RK

EMDB-49386:
CryoEM structure of human ABCD3 bound to Phytanoyl-CoA
Method: single particle / : Gupta M, Khandelwal NK, Stroud RM

EMDB-49388:
CryoEM structure of human ABCD3
Method: single particle / : Gupta M, Khandelwal NK, Stroud RM

PDB-9ngj:
CryoEM structure of human ABCD3 bound to Phytanoyl-CoA
Method: single particle / : Gupta M, Khandelwal NK, Stroud RM

PDB-9ngm:
CryoEM structure of human ABCD3
Method: single particle / : Gupta M, Khandelwal NK, Stroud RM

EMDB-67283:
C1 Symmetry of DNA tesseract
Method: single particle / : Shiu SCC

EMDB-67284:
Octahedral Symmetry of DNA Tesseract
Method: single particle / : Shiu SCC

EMDB-62580:
Structure of JR14a bound to human C3aR in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

EMDB-62586:
Structure of mouse TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62588:
Structure of human TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62598:
Structure of SB290157 bound to human C3aR in complex with Go (Full map)
Method: single particle / : Banerjee R, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Nureki O, Shukla AK

EMDB-62610:
Structure of mouse C5a bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62619:
Structure of mouse C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62624:
Structure of human C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62636:
Structure of beta-arrestin2 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62649:
Structure of beta-arrestin1 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62665:
Structure of mouse C3a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62712:
Structure of JR14a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK, Gati C

EMDB-64276:
Structure of EP54 bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-64291:
Structure of C5a-pep bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK, Gati C

EMDB-64325:
Structure of EP54 bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK, Gati C

PDB-9kut:
Structure of JR14a bound to human C3aR in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

PDB-9kv6:
Structure of mouse TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kv8:
Structure of human TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kvp:
Structure of SB290157 bound to human C3aR in complex with Go (Full map)
Method: single particle / : Banerjee R, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Nureki O, Shukla AK

PDB-9kwg:
Structure of mouse C5a bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kwx:
Structure of mouse C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kx6:
Structure of human C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9ky2:
Structure of beta-arrestin2 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kyu:
Structure of beta-arrestin1 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kzk:
Structure of mouse C3a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9l0h:
Structure of JR14a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK

PDB-9umj:
Structure of EP54 bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9umr:
Structure of C5a-pep bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK

PDB-9umx:
Structure of EP54 bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK

EMDB-71976:
Inactive-state naloxone-mu opioid receptor nanobody6 complex - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71977:
Inactive-state naloxone-mu opioid receptor nanobody6 complex - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71978:
Inactive-state naloxone-mu opioid receptor nanobody6 complex - Locally refined fiducal map
Method: single particle / : Gati C, Khan S, Han GW

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more