[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 58 items for (author: kelman & z)

EMDB-55150:
Consensus reconstruction of the Mlc tetramer
Method: single particle / : Roth P, Fotiadis D

EMDB-55151:
Focussed refinement of the Mlc tetramer
Method: single particle / : Roth P, Fotiadis D

EMDB-55152:
Focused refinement of Mlc tetramer
Method: single particle / : Roth P, Fotiadis D

EMDB-55153:
Cryo-EM structure of the Mlc tetramer
Method: single particle / : Roth P, Fotiadis D

EMDB-55154:
Consensus reconstruction of Mlc tetramer in complex with ptsG operator DNA
Method: single particle / : Roth P, Fotiadis D

EMDB-55155:
Focused reconstruction of Mlc tetramer in complex with ptsG operator DNA
Method: single particle / : Roth P, Fotiadis D

EMDB-55156:
Cryo-EM structure of Mlc in complex with ptsG operator DNA
Method: single particle / : Roth P, Fotiadis D

EMDB-55157:
Consensus reconstruction of the Mlc tetramer in complex with the anti-repressor MtfA
Method: single particle / : Roth P, Fotiadis D

EMDB-55158:
Focused reconstruction of the Mlc tetramer in complex with the anti-repressor MtfA
Method: single particle / : Roth P, Fotiadis D

EMDB-55159:
Focused reconstruction of the Mlc tetramer in complex with the anti-repressor MtfA
Method: single particle / : Roth P, Fotiadis D

EMDB-55160:
Cryo-EM structure of the Mlc tetramer in complex with the anti-repressor MtfA
Method: single particle / : Roth P, Fotiadis D

EMDB-55161:
Consensus reconstruction of the Mlc tetramer in complex with the glucose-specific IICB transporter
Method: single particle / : Roth P, Fotiadis D

EMDB-55162:
Focused reconstruction of the Mlc tetramer in complex with the glucose-specific IICB transporter
Method: single particle / : Roth P, Fotiadis D

EMDB-55163:
Focused reconstruction of the Mlc tetramer in complex with the glucose-specific IICB transporter
Method: single particle / : Roth P, Fotiadis D

EMDB-55164:
Focused reconstruction of the Mlc tetramer in complex with the glucose-specific IICB transporter
Method: single particle / : Roth P, Fotiadis D

EMDB-55165:
Cryo-EM structure of the Mlc repressor in complex with the glucose-specific IICB transporter
Method: single particle / : Roth P, Fotiadis D

PDB-9srt:
Cryo-EM structure of the Mlc tetramer
Method: single particle / : Roth P, Fotiadis D

PDB-9sru:
Cryo-EM structure of Mlc in complex with ptsG operator DNA
Method: single particle / : Roth P, Fotiadis D

PDB-9srw:
Cryo-EM structure of the Mlc tetramer in complex with the anti-repressor MtfA
Method: single particle / : Roth P, Fotiadis D

PDB-9srx:
Cryo-EM structure of the Mlc repressor in complex with the glucose-specific IICB transporter
Method: single particle / : Roth P, Fotiadis D

EMDB-43554:
In vitro reconstituted human chromatin
Method: electron tomography / : Uckelmann M, Taveneau C, Levina V, Trepout S, de Marco A, Davidovich C

EMDB-52458:
In vitro grown K58N Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Al-Azzani M, Outeiro TF, Fernandez-Busnadiego R

PDB-9hxa:
In vitro grown K58N Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Al-Azzani M, Outeiro TF, Fernandez-Busnadiego R

EMDB-52166:
In vitro grown G14R Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Fernandez-Busnadiego R

PDB-9hgs:
In vitro grown G14R Alpha-Synuclein Fibrils
Method: single particle / : Sicking K, Fernandez-Busnadiego R

EMDB-18640:
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-open state
Method: single particle / : Roth P, Fotiadis D, Jeckelmann JM

EMDB-18641:
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-open state
Method: single particle / : Roth P, Fotiadis D, Jeckelmann JM

PDB-8qsr:
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-facing conformation
Method: single particle / : Roth P, Fotiadis D, Jeckelmann JM

PDB-8qst:
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward- and outward-facing conformation
Method: single particle / : Roth P, Fotiadis D, Jeckelmann JM

EMDB-29022:
Reconstituted chromatin condensed by the PRC1-CBX8 complex
Method: electron tomography / : Uckelmann M, Taveneau C, Levina V, de Marco A, Davidovich C

EMDB-29644:
Structure of signaling thrombopoietin-MPL receptor complex
Method: single particle / : Tsutsumi N, Jude KM, Gati C, Garcia KC

PDB-8g04:
Structure of signaling thrombopoietin-MPL receptor complex
Method: single particle / : Tsutsumi N, Jude KM, Gati C, Garcia KC

EMDB-32094:
Cryo-EM structure of H2A-ubiquitinated nucleosome
Method: single particle / : Ohtomo H, Ito S, McKenzie NJ, Uckelmann M, Wakamori M, Ehara H, Tsunaka Y, Shibata M, Sekine S, Umehara T, Davidovich C, Koseki H, Nishimura Y

EMDB-24148:
Escherichia coli sigma 70-dependent paused transcription elongation complex
Method: single particle / : Molodtsov V, Su M

PDB-7n4e:
Escherichia coli sigma 70-dependent paused transcription elongation complex
Method: single particle / : Molodtsov V, Su M, Ebright RH

EMDB-24424:
Cryo-EM structure of Thermus thermophilus reiterative transcription complex with 11nt oligo-G RNA
Method: single particle / : Liu Y, Ebright RH

PDB-7rdq:
Cryo-EM structure of Thermus thermophilus reiterative transcription complex with 11nt oligo-G RNA
Method: single particle / : Liu Y, Ebright RH

EMDB-11066:
CryoEM structure of horse sodium/proton exchanger NHE9 in an inward-facing conformation
Method: single particle / : Winkelmannm I, Matsuoka R

EMDB-11067:
CryoEM structure of horse sodium/proton exchanger NHE9 without C-terminal regulatory domain in an inward-facing conformation
Method: single particle / : Winkelmann I, Matsuoka R

PDB-6z3y:
CryoEM structure of horse sodium/proton exchanger NHE9 in an inward-facing conformation
Method: single particle / : Winkelmannm I, Matsuoka R, Meier P, Drew D

PDB-6z3z:
CryoEM structure of horse sodium/proton exchanger NHE9 without C-terminal regulatory domain in an inward-facing conformation
Method: single particle / : Winkelmann I, Matsuoka R, Meier P, Drew D

EMDB-20460:
Escherichia coli RNA polymerase closed complex (TRPc) with TraR and rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE

EMDB-20461:
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi1) with TraR and rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE

EMDB-20462:
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi1.5a) with TraR and mutant rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE

EMDB-20463:
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi1.5b) with TraR and mutant rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE

EMDB-20464:
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi2) with TraR and rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE

EMDB-20465:
Escherichia coli RNA polymerase promoter unwinding intermediate (TpreRPo) with TraR and rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE

EMDB-20466:
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPo) with TraR and rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE

PDB-6psq:
Escherichia coli RNA polymerase closed complex (TRPc) with TraR and rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE, Campbell EA, Darst SA

PDB-6psr:
Escherichia coli RNA polymerase promoter unwinding intermediate (TRPi1) with TraR and rpsT P2 promoter
Method: single particle / : Chen J, Chiu CE, Campbell EA, Darst SA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more