[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 186 items for (author: julius & r)

EMDB-57201:
Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.
Method: single particle / : Rabl J, Karousis ED

EMDB-57202:
Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.
Method: single particle / : Rabl J, Karousis ED

EMDB-57203:
Human monosomes, focus on 60S subunit; control.
Method: single particle / : Rabl J, Karousis ED

EMDB-57204:
Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2
Method: single particle / : Rabl J, Karousis ED

PDB-29iw:
Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.
Method: single particle / : Rabl J, Karousis ED

PDB-29ix:
Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.
Method: single particle / : Rabl J, Karousis ED

PDB-29iy:
Human monosomes, focus on 60S subunit; control.
Method: single particle / : Rabl J, Karousis ED

PDB-29iz:
Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2
Method: single particle / : Rabl J, Karousis ED

EMDB-54355:
Cryo-EM structure of a single-chain beta1-adrenoceptor - AmpC beta-lactamase fusion protein
Method: single particle / : Benoit RM, Afanasyev P

PDB-9rx1:
Cryo-EM structure of a single-chain beta1-adrenoceptor - AmpC beta-lactamase fusion protein
Method: single particle / : Benoit RM, Afanasyev P

EMDB-54283:
Human UAP56-RNA - SAC3D1-PCID2-SEM1 complex, Map A
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-54284:
Map B of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-58456:
Electron tomogram of the postmitotic nuclear envelope following acute Nup62 depletion
Method: electron tomography / : Zhang W, Ellenberg J

EMDB-54282:
Cryo-EM structure of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56930:
Cryo-EM structure of the human SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56931:
Cryo-EM structure of the human LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56932:
Cryo-EM structure of the human UAP56 NTD - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56933:
Cryo-EM structure of the human UAP56-RNA - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28wy:
Cryo-EM structure of the human SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28wz:
Cryo-EM structure of the human LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28xa:
Cryo-EM structure of the human UAP56 NTD - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28xb:
Cryo-EM structure of the human UAP56-RNA - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-9rv1:
Cryo-EM structure of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-53238:
Invasive protrusion of a flam-del-412-St2 Drosophila follicle
Method: electron tomography / : Voichek M, Bernhard A, Brennecke J

EMDB-56096:
SP100 CARD filament
Method: helical / : Rabl J, Aird E, Corn J

PDB-9tnz:
SP100 CARD filament
Method: helical / : Rabl J, Aird E, Corn J

EMDB-18977:
Cryo-EM structure of the human TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-18978:
Cryo-EM structure of the human UAP56 - TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-18979:
Cryo-EM structure of the human TREX complex
Method: single particle / : Hohmann U, Pacheco-Fiallos B, Plaschka C

EMDB-18981:
Structure of the human UAP56 RecA1 RecA2 - TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-8r7j:
Cryo-EM structure of the human TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-8r7k:
Cryo-EM structure of the human UAP56 - TREX-2 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-8r7l:
Cryo-EM structure of the human TREX complex
Method: single particle / : Hohmann U, Pacheco-Fiallos B, Plaschka C

EMDB-19643:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

EMDB-19644:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

EMDB-19645:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

EMDB-19646:
Tomographic reconstruction of the follicle cell nuclear periphery from high pressure frozen, freeze substituted and resin embedded D. melanogaster egg chamber
Method: electron tomography / : Klumpe S, Hampoelz B, Ronchi P, Beck M, Plitzko J

EMDB-19647:
Tomographic reconstruction of nuclear copia VLP clusters in D. melanogaster ovarian somatic cells
Method: electron tomography / : Klumpe S, Beck F, Briggs JAG, Beck M, Plitzko JM

EMDB-19648:
Tomogram of the nuclear periphery of a follicle cell from lift-out experiments on D. melanogaster egg chambers
Method: electron tomography / : Klumpe S, Beck F, Beck M, Plitzko JM

EMDB-19649:
In situ copia VLP cluster subtomogram averaging, C1-C1 contact map
Method: subtomogram averaging / : Klumpe S, Beck F, Briggs JAG, Beck M, Plitzko JM

EMDB-19650:
In situ copia VLP cluster subtomogram averaging, C1-C5 contact map
Method: subtomogram averaging / : Klumpe S, Beck F, Plitzko JM

EMDB-19651:
In situ copia VLP cluster subtomogram averaging, C5-C5 contact map
Method: subtomogram averaging / : Klumpe S, Beck F, Briggs JAG, Beck M, Plitzko JM

EMDB-19708:
The structure of the copia retrotransposon icosahedral capsid (T=9)
Method: subtomogram averaging / : Klumpe S, Beck F, Briggs JAG, Beck M, Plitzko JM

PDB-8s41:
The structure of the copia retrotransposon icosahedral capsid (T=9)
Method: subtomogram averaging / : Klumpe S, Beck F, Briggs JAG, Beck M, Plitzko JM

EMDB-50589:
DNA-directed RNA polymerase with transcriptional activator PafBC
Method: single particle / : Zdanowicz R, Schilling CM, Rabl J, Mueller AU, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-50590:
Transcriptional activator PafBC bound to mycobacterial RNA polymerase
Method: single particle / : Zdanowicz R, Schilling CM, Rabl J, Mueller AU, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-50591:
Composite map of the mycobacterial PafBC-bound transcription initiation complex
Method: single particle / : Zdanowicz R, Schilling CM, Rabl J, Mueller AU, Boehringer D, Glockshuber R, Weber-Ban E

PDB-9fnd:
Transcriptional activator PafBC bound to mycobacterial RNA polymerase
Method: single particle / : Zdanowicz R, Schilling CM, Rabl J, Mueller AU, Boehringer D, Glockshuber R, Weber-Ban E

PDB-9fne:
Mycobacterial PafBC-bound transcription initiation complex
Method: single particle / : Zdanowicz R, Schilling CM, Rabl J, Mueller AU, Boehringer D, Glockshuber R, Weber-Ban E

EMDB-18980:
Structure of a human TREX complex (with the THO tetramer).
Method: single particle / : Hohmann U, Pacheco-Fiallos B, Plaschka C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more