[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 414 items for (author: jones & t)

EMDB-17730:
masked refinement giving rise to better defined protruding densities of the potential macrodomain outside the AUD helical assemblies.

EMDB-17295:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation

PDB-8oyt:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation

EMDB-43329:
Structure of VCP in complex with an ATPase activator (D2 domains only, hexameric form)

EMDB-43343:
Structure of VCP in complex with an ATPase activator (D2 domains only, dodecameric form)

EMDB-43392:
Structure of VCP in complex with an ATPase activator and ADP (D2 domains only, hexameric form)

PDB-8vku:
Structure of VCP in complex with an ATPase activator (D2 domains only, hexameric form)

PDB-8vls:
Structure of VCP in complex with an ATPase activator (D2 domains only, dodecameric form)

PDB-8vov:
Structure of VCP in complex with an ATPase activator and ADP (D2 domains only, hexameric form)

EMDB-17296:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation

PDB-8oyu:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation

EMDB-41904:
Klebsiella pneumoniae encapsulin-associated DyP peroxidase

EMDB-41905:
Klebsiella pneumoniae DyP peroxidase-loaded encapsulin shell

EMDB-41906:
Klebsiella pneumoniae SUMO-loaded encapsulin shell

PDB-8u4z:
Klebsiella pneumoniae encapsulin-associated DyP peroxidase

PDB-8u50:
Klebsiella pneumoniae DyP peroxidase-loaded encapsulin shell

PDB-8u51:
Klebsiella pneumoniae SUMO-loaded encapsulin shell

EMDB-19406:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12

EMDB-19407:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24

PDB-8rox:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12

PDB-8roy:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24

EMDB-16816:
Structure of TolQR complex from E.coli

PDB-8odt:
Structure of TolQR complex from E.coli

EMDB-16005:
GABA-A receptor a5 homomer - a5V3 - APO

EMDB-16050:
GABA-A receptor a5 homomer - a5V3 - Basmisanil - HR

EMDB-16051:
GABA-A receptor a5 homomer - a5V3 - RO154513

EMDB-16055:
GABA-A receptor a5 homomer - a5V3 - RO5211223

EMDB-16058:
GABA-A receptor a5 homomer - a5V3 - Diazepam

EMDB-16060:
GABA-A receptor a5 homomer - a5V3 - DMCM

EMDB-16063:
GABA-A receptor a5 homomer - a5V3 - L655708

EMDB-16066:
GABA-A receptor a5 homomer - a5V3 - RO7172670

EMDB-16067:
GABA-A receptor a5 homomer - a5V3 - RO7015738

EMDB-16068:
GABA-A receptor a5 homomer - a5V3 - RO4938581

PDB-8bej:
GABA-A receptor a5 homomer - a5V3 - APO

PDB-8bha:
GABA-A receptor a5 homomer - a5V3 - Basmisanil - HR

PDB-8bhb:
GABA-A receptor a5 homomer - a5V3 - RO154513

PDB-8bhi:
GABA-A receptor a5 homomer - a5V3 - RO5211223

PDB-8bhk:
GABA-A receptor a5 homomer - a5V3 - Diazepam

PDB-8bhm:
GABA-A receptor a5 homomer - a5V3 - DMCM

PDB-8bho:
GABA-A receptor a5 homomer - a5V3 - L655708

PDB-8bhq:
GABA-A receptor a5 homomer - a5V3 - RO7172670

PDB-8bhr:
GABA-A receptor a5 homomer - a5V3 - RO7015738

PDB-8bhs:
GABA-A receptor a5 homomer - a5V3 - RO4938581

EMDB-17586:
E. coli RNA polymerase elongation complex stalled at thymine dimer lesion

PDB-8pbl:
E. coli RNA polymerase elongation complex stalled at thymine dimer lesion

EMDB-18383:
Cryo-EM structure of SidH from Legionella pneumophila

EMDB-18407:
Cryo-EM structure of SidH from Legionella pneumophila in complex with LubX

PDB-8qfs:
Cryo-EM structure of SidH from Legionella pneumophila

PDB-8qhc:
Cryo-EM structure of SidH from Legionella pneumophila in complex with LubX

EMDB-16052:
Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more