[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,556 items for (author: jia & g)


EMDB entry, No image

EMDB-43706:
Human DNA polymerase theta helicase domain in complex with ssDNA, dimer form
Method: single particle / : Ito F, Li Z, Chen XS


EMDB entry, No image

EMDB-43816:
Human DNA polymerase theta helicase domain in complex with AMP-PNP, dimer form
Method: single particle / : Ito F, Li Z, Chen XS


EMDB entry, No image

EMDB-43817:
Human DNA polymerase theta helicase domain dimer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS


EMDB entry, No image

EMDB-43818:
Human DNA polymerase theta helicase domain tetramer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS


EMDB entry, No image

EMDB-45217:
Human DNA polymerase theta helicase domain in microhomology annealed state 1, dimer form
Method: single particle / : Ito F, Li Z, Chen XS


EMDB entry, No image

EMDB-45218:
Human DNA polymerase theta helicase domain in microhomology annealed state 2, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-8w0a:
Human DNA polymerase theta helicase domain in complex with ssDNA, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9asj:
Human DNA polymerase theta helicase domain in complex with AMP-PNP, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9ask:
Human DNA polymerase theta helicase domain dimer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9asl:
Human DNA polymerase theta helicase domain tetramer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9c5q:
Human DNA polymerase theta helicase domain in microhomology annealed state 2, dimer form
Method: single particle / : Ito F, Li Z, Chen XS


EMDB entry, No image

EMDB-18723:
Cryo-EM structure of the cross-exon pre-B complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R


EMDB entry, No image

EMDB-18724:
Cryo-EM structure of the cross-exon pre-B+5'ss complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R


EMDB entry, No image

EMDB-18725:
Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex(tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R


EMDB entry, No image

EMDB-18726:
Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPgammaS complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R


EMDB entry, No image

EMDB-18727:
Cryo-EM structure of the cross-exon pre-B+AMPPNP complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R


EMDB entry, No image

EMDB-18202:
Copper-transporting ATPase HMA4 in E1 state apo
Method: single particle / : Guo Z, Gourdon P, Wang K


EMDB entry, No image

EMDB-18203:
Copper-transporting ATPase HMA4 in E1 state with Cu
Method: single particle / : Guo Z, Gourdon P, Wang K


EMDB entry, No image

EMDB-18204:
Copper-transporting ATPase HMA4 in E2P state with AlF
Method: single particle / : Guo Z, Gourdon P, Wang K


EMDB entry, No image

EMDB-18205:
Copper-transporting ATPase HMA4 in E2P state with BeF
Method: single particle / : Guo Z, Gourdon P, Wang K

PDB-8q73:
Copper-transporting ATPase HMA4 in E1 state apo
Method: single particle / : Guo Z, Gourdon P, Wang K

PDB-8q74:
Copper-transporting ATPase HMA4 in E1 state with Cu
Method: single particle / : Guo Z, Gourdon P, Wang K

PDB-8q75:
Copper-transporting ATPase HMA4 in E2P state with AlF
Method: single particle / : Guo Z, Gourdon P, Wang K

PDB-8q76:
Copper-transporting ATPase HMA4 in E2P state with BeF
Method: single particle / : Guo Z, Gourdon P, Wang K


EMDB entry, No image

EMDB-37553:
BA.2.86 RBD in complex with hACE2 (local refinement)
Method: single particle / : Yue C, Liu P


EMDB entry, No image

EMDB-38056:
BA.2.86 Spike Trimer with ins483V mutation (3 RBD down)
Method: single particle / : Yue C, Liu P


EMDB entry, No image

EMDB-38057:
BA.2.86 Spike Trimer with ins483V mutation (1 RBD up)
Method: single particle / : Yue C, Liu P


EMDB entry, No image

EMDB-38063:
BA.2.86 Spike Trimer with T356K mutation (3 RBD down)
Method: single particle / : Yue C, Liu P


EMDB entry, No image

EMDB-38064:
BA.2.86 Spike Trimer with T356K mutation (1 RBD up)
Method: single particle / : Yue C, Liu P


EMDB entry, No image

EMDB-38700:
XBB.1.5-K356T S-trimer (1 RBD up)
Method: single particle / : Yue C, Liu P


EMDB entry, No image

EMDB-38701:
XBB.1.5-K356T S-trimer (3 RBDs down)
Method: single particle / : Yue C, Liu P

EMDB-19395:
CryoEM structure of recombinant human Bri2 BRICHOS oligomers
Method: single particle / : Chen G, Johansson J, Hebert H

PDB-8rnu:
CryoEM structure of recombinant human Bri2 BRICHOS oligomers
Method: single particle / : Chen G, Johansson J, Hebert H

EMDB-37210:
Prefusion RSV F Bound to Lonafarnib and D25 Fab
Method: single particle / : Yang Q, Xue B, Liu F, Peng W, Chen X

PDB-8kg5:
Prefusion RSV F Bound to Lonafarnib and D25 Fab
Method: single particle / : Yang Q, Xue B, Liu F, Peng W, Chen X

EMDB-44839:
Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44840:
Intact V-ATPase State 3 and synaptophysin complex in mouse brain isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44841:
Intact V-ATPase State 3 in synaptophysin knock-out isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44842:
Intact V-ATPase State 2 in synaptophysin knock-out isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44843:
Intact V-ATPase State 1 and synaptophysin complex in mouse brain isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44844:
Intact V-ATPase State 1 in synaptophysin knock-out isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44845:
V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44846:
V0-only V-ATPase and synaptophysin complex in mouse brain isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44847:
Tomograms of isolated synaptic vesicles from Syp-/- mouse brain
Method: electron tomography / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44848:
Tomograms of isolated synaptic vesicles from wild-type mouse brain
Method: electron tomography / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44855:
Intact state1 V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging
Method: subtomogram averaging / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44856:
Intact state2 V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging
Method: subtomogram averaging / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44857:
Intact state3 V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging
Method: subtomogram averaging / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

EMDB-44858:
V0-only V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging
Method: subtomogram averaging / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

PDB-9bra:
Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles
Method: single particle / : Wang C, Jiang W, Yang K, Wang X, Guo Q, Brunger AT

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more