[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,305 items for (author: jen & a)

EMDB-53004:
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Method: single particle / : Shilliday F, Maia de Oliveira T, Gancedo-Rodrigo M

PDB-9qc6:
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Method: single particle / : Shilliday F, Maia de Oliveira T, Gancedo-Rodrigo M

EMDB-53056:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB4/7
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53057:
CryoEM structure of transcribing RNA polymerase II elongation complex_Composite map
Method: single particle / : Li Q, Yi Q, Zhang P, Wang D

EMDB-53060:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB9
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53062:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of Jaw/RPB9
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53063:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB12/Wall
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53064:
CryoEM structure of transcribing RNA polymerase II elongation complex_3D classification map containing the complete nucleic acid scaffold
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-55043:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-55044:
CM1-activated gTuRC in complex with nascent wildtype microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

PDB-9smx:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-71611:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in NTP-bound elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-71612:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-reaction elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-71613:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-71614:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in post-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pfr:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in NTP-bound elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pfs:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-reaction elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pft:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pfu:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in post-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-75840:
Cryo-EM structure of CRBN in complex with HBS1L and TNG-4857 (focused refinement)
Method: single particle / : Whittington DA

PDB-11mr:
Cryo-EM structure of CRBN in complex with HBS1L and TNG-4857 (focused refinement)
Method: single particle / : Whittington DA

EMDB-52236:
Drosophila melanogaster insulin receptor ectodomain in complex with one DILP2 molecule
Method: single particle / : Shafi T, Moroz OV, Jenkins HT, Chechik M, Isupov MN, Brzozowski AM

EMDB-52310:
Drosophila melanogaster insulin receptor ectodomain in complex with two DILP2 molecules
Method: single particle / : Shafi T, Moroz OV, Jenkins HT, Chechik M, Isupov MN, Brzozowski AM

PDB-9hkt:
Drosophila melanogaster insulin receptor ectodomain in complex with one DILP2 molecule
Method: single particle / : Shafi T, Moroz OV, Jenkins HT, Chechik M, Isupov MN, Brzozowski AM

PDB-9hni:
Drosophila melanogaster insulin receptor ectodomain in complex with two DILP2 molecules
Method: single particle / : Shafi T, Moroz OV, Jenkins HT, Chechik M, Isupov MN, Brzozowski AM

EMDB-75038:
Cryo-EM structure of CRBN-DDB1 in complex with HBS1L and TNG961
Method: single particle / : Whittington DA

PDB-10ay:
Cryo-EM structure of CRBN-DDB1 in complex with HBS1L and TNG961
Method: single particle / : Whittington DA

EMDB-63033:
Cryo-EM structure of human ZAC in zinc Binding State
Method: single particle / : Qu Q, Zhou Z

EMDB-63034:
Cryo-EM structure of human ZAC with A152 mutant in zinc binding state
Method: single particle / : Qu Q, Zhou Z

EMDB-63035:
Cryo-EM structure of human ZAC in nanodisc in apo state
Method: single particle / : Qu Q, Zhou Z

EMDB-63036:
Cryo-EM structure of human ZAC in zinc partially binding state in nanodisc
Method: single particle / : Qu Q, Zhou Z

EMDB-63037:
Cryo-EM structure of human ZAC in complex with d-tubocurarine
Method: single particle / : Qu Q, Zhou Z

EMDB-63038:
Cryo-EM structure of human ZAC in complex with N-(4-(tert-butyl)thiazol-2-yl)-3-fluorobenzamide (TTFB)
Method: single particle / : Qu Q, Zhou Z

PDB-9let:
Cryo-EM structure of human ZAC in zinc Binding State
Method: single particle / : Qu Q, Zhou Z

PDB-9leu:
Cryo-EM structure of human ZAC with A152 mutant in zinc binding state
Method: single particle / : Qu Q, Zhou Z

PDB-9lev:
Cryo-EM structure of human ZAC in nanodisc in apo state
Method: single particle / : Qu Q, Zhou Z

PDB-9lex:
Cryo-EM structure of human ZAC in zinc partially binding state in nanodisc
Method: single particle / : Qu Q, Zhou Z

PDB-9ley:
Cryo-EM structure of human ZAC in complex with d-tubocurarine
Method: single particle / : Qu Q, Zhou Z

PDB-9lez:
Cryo-EM structure of human ZAC in complex with N-(4-(tert-butyl)thiazol-2-yl)-3-fluorobenzamide (TTFB)
Method: single particle / : Qu Q, Zhou Z

EMDB-55416:
HPFcold Bound Hibernating C. burnetii 30S Ribosome
Method: single particle / : Stuart WS, Isupov MN, Harmer NJ

EMDB-55601:
Doxycycline Bound C. burnetii 30S Ribosome
Method: single particle / : Stuart WS, Isupov MN, Harmer NJ

EMDB-55330:
30S Doxycycline Bound E. coli Ribosome
Method: single particle / : Stuart WS, Isupov MN, Harmer NJ

EMDB-55001:
Doxycycline Bound E. coli Ribosome with Rearranged Peptidyl Transferase Centre
Method: single particle / : Stuart WS, Isupov MN, Harmer NJ

EMDB-56459:
Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
Method: single particle / : Stuart WS, Isupov MN, Harmer NJ

EMDB-56466:
70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
Method: single particle / : Stuart WS, Isupov MN, Harmer NJ

EMDB-56461:
Empty 50S Subunit of the Coxiella burnetii Ribosome
Method: single particle / : Stuart WS, Isupov MN, Harmer NJ

EMDB-74435:
Dimer of BrxC-BrxB fusion complexed with PglZ from the Acinetobacter BREX system
Method: single particle / : Doyle LA, Stoddard BL, Kaiser B, Kaiser A

PDB-9zn5:
Hybrid model of a dimer of BrxC-BrxB fusion complexed with PglZ from the Acinetobacter BREX system
Method: single particle / : Doyle LA, Stoddard BL, Kaiser B, Kaiser A

EMDB-70071:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to fluornitrazene (FNZ)
Method: single particle / : Robertson MJ, Skiniotis G

PDB-9o36:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to fluornitrazene (FNZ)
Method: single particle / : Robertson MJ, Skiniotis G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more