[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 691 items for (author: hug & n)

EMDB-43738:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, TDI-2804 (consensus map).
Method: single particle / : Malone BF, Zimmerman JL, Dow LE, Hite RK

EMDB-43739:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, TDI-2804 (focused refinement map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

EMDB-43740:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, XAV (consensus map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

EMDB-43741:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, XAV (focused refinement map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

EMDB-43758:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament - apo state (focused refinement map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

EMDB-43759:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament -apo state (consensus map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

PDB-8w23:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, TDI-2804 (consensus map).
Method: single particle / : Malone BF, Zimmerman JL, Dow LE, Hite RK

PDB-8w25:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, TDI-2804 (focused refinement map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

PDB-8w27:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, XAV (consensus map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

PDB-8w28:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, XAV (focused refinement map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

PDB-8w2t:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament - apo state (focused refinement map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

PDB-8w2u:
Cryo-EM structure of human tankyrase 2 SAM-PARP filament -apo state (consensus map).
Method: helical / : Malone BF, Zimmerman JL, Dow LE, Hite RK

EMDB-43673:
Cryo-EM Structure of the BRAF WT monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-43674:
Cryo-EM Structure of the BRAF V600E monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-43675:
Cryo-EM Structure of the BRAF V600K monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-43676:
Cryo-EM Structure of the BRAF V600E monomer bound to GDC0879
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-43677:
Cryo-EM Structure of the BRAF V600E monomer bound to PLX8394
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-43678:
Cryo-EM Structure of the BRAF WT monomer bound to PLX8394
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-43679:
Cryo-EM Structure of the BRAF K601E monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-43680:
Cryo-EM Structure of the BRAF D594G monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vyo:
Cryo-EM Structure of the BRAF WT monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vyp:
Cryo-EM Structure of the BRAF V600E monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vyq:
Cryo-EM Structure of the BRAF V600K monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vyr:
Cryo-EM Structure of the BRAF V600E monomer bound to GDC0879
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vys:
Cryo-EM Structure of the BRAF V600E monomer bound to PLX8394
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vyu:
Cryo-EM Structure of the BRAF WT monomer bound to PLX8394
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vyv:
Cryo-EM Structure of the BRAF K601E monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

PDB-8vyw:
Cryo-EM Structure of the BRAF D594G monomer
Method: single particle / : Lavoie H, Lajoie D, Jin T, Decossas M, Maisonneuve P, Therrien M

EMDB-53399:
Cryo-EM reconstruction of the NEDD1 anchor protein and CDK5RAP2 bound to the gamma-tubulin ring complex
Method: single particle / : Munoz-Hernandez H, Xu Y, Wieczorek M

EMDB-53400:
Cryo-EM reconstruction of the NEDD1 anchor protein bound to the gamma-tubulin ring complex
Method: single particle / : Munoz-Hernandez H, Xu Y, Wieczorek M

PDB-9qvm:
Cryo-EM reconstruction of the NEDD1 anchor protein and CDK5RAP2 bound to the gamma-tubulin ring complex
Method: single particle / : Munoz-Hernandez H, Xu Y, Wieczorek M

PDB-9qvn:
Cryo-EM reconstruction of the NEDD1 anchor protein bound to the gamma-tubulin ring complex
Method: single particle / : Munoz-Hernandez H, Xu Y, Wieczorek M

EMDB-51777:
Structure of DPS determined at 13K in 100 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ

EMDB-51778:
Structure of DPS determined at 81K in 100 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ

EMDB-51779:
Structure of apoferritin determined at 13K in 100 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Crusso CJ

EMDB-51780:
Structure of apoferritin determined at 81K in 100 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ

EMDB-51781:
Structure of apoferritin determined at 13K in 100 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ

EMDB-51782:
Structure of apoferritin determined at 81K in 100 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ

EMDB-51783:
Structure of apoferritin determined at 13K in 300 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ

EMDB-51784:
Structure of apoferritin determined at 81K in 300 nm diameter holes.
Method: single particle / : Dickerson JL, Naydenova K, Peet MJ, Wilson H, Nandy B, McMullan G, Morrison R, Russo CJ

EMDB-52589:
Cryo-tomogram of FIB-milled wild-type untreated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-52590:
Cryo-tomogram of a FIB-milled stm1-deletion untreated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-52591:
Cryo-tomogram of a FIB-milled wild-type rapamycin treated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-52592:
Cryo-tomogram of a FIB-milled stm1-deletion rapamycin treated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-52708:
Enterobacteriaphage PRD1 - P12 protein filament in complex with poly(dT) ssDNA
Method: helical / : Degen M, Traeger KL, Hiller S

EMDB-52709:
Enterobacteriaphage PRD1 - P12 protein filament in complex with repetitive (ATGCT) ssDNA
Method: helical / : Degen M, Traeger KL, Hiller S

EMDB-52710:
Enterobacteriaphage PRD1 - P12 protein filament in complex with non-repetitive ssDNA
Method: helical / : Degen M, Traeger KL, Hiller S

PDB-9i86:
Enterobacteriaphage PRD1 - P12 protein filament in complex with poly(dT) ssDNA
Method: helical / : Degen M, Traeger KL, Hiller S

EMDB-45413:
E2F1-Cyclin F Interface
Method: single particle / : Ngoi P, Serrao VH, Rubin SM

PDB-9cb3:
E2F1-Cyclin F Interface
Method: single particle / : Ngoi P, Serrao VH, Rubin SM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more