[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 23,377 items for (author: hu & k)

EMDB-75887:
SARS-CoV-2 Omicron BA.4 RBD in complex with Omi32 Fab and LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

EMDB-75889:
SARS-CoV-2 Omicron BA.4 RBD in complex with Omi32 germline Fab and LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

EMDB-75891:
SARS-CoV-2 Omicron BA.1 RBD in complex with Omi32 germline Fab and LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

EMDB-75892:
Omi32 Fab in complex with LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

EMDB-75893:
Omi32 germline Fab in complex with LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

PDB-11ol:
SARS-CoV-2 Omicron BA.4 RBD in complex with Omi32 Fab and LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

PDB-11oo:
SARS-CoV-2 Omicron BA.4 RBD in complex with Omi32 germline Fab and LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

PDB-11oq:
SARS-CoV-2 Omicron BA.1 RBD in complex with Omi32 germline Fab and LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

PDB-11or:
Omi32 Fab in complex with LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

PDB-11ou:
Omi32 germline Fab in complex with LC-Kappa VHH
Method: single particle / : Kang G, Phillips AM, Catalano C, Scapin G

EMDB-55321:
Cryo-EM structure of yeast telomerase holoenzyme
Method: single particle / : Hu H, Franco-Echevarria E, Nguyen THD, Ahsan B, Oluwole A, Peak-Chew S, Robinson CV

EMDB-55322:
The catalytic core of yeast telomerase holoenzyme
Method: single particle / : Hu H, Franco-Echevarria E, Nguyen THD, Ahsan B, Oluwole A, Peak-Chew S, Robinson CV

EMDB-74880:
Dimer structure of Thlaspi arvense plastid biotin carboxylase
Method: single particle / : Madison HJ, Van Doren SR, Yokom AL

EMDB-74881:
Tetramer structure of Thlaspi arvense plastid biotin carboxylase
Method: single particle / : Madison HJ, Van Doren SR, Yokom AL

PDB-9zvm:
Dimer structure of Thlaspi arvense plastid biotin carboxylase
Method: single particle / : Madison HJ, Van Doren SR, Yokom AL

EMDB-64903:
Cryo-EM structure of formate dehydrogenase from Shewanella oneidensis MR-1 (SoFdhAB)
Method: single particle / : Liu W, Zhang L

PDB-9vap:
Cryo-EM structure of formate dehydrogenase from Shewanella oneidensis MR-1 (SoFdhAB)
Method: single particle / : Liu W, Zhang L

EMDB-71158:
Structure of human cardiac sodium channel Nav1.5 in intermediate open state
Method: single particle / : Biswas R, Chinthalapudi K

PDB-9p24:
Structure of human cardiac sodium channel Nav1.5 in intermediate open state
Method: single particle / : Biswas R, Chinthalapudi K

EMDB-64791:
CryoEM structure of human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

PDB-9v5p:
Human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

EMDB-69358:
Cryo-EM structure of human sodium/proton antiporter NHE1 in complex with Cariporide in an outward-open conformation
Method: single particle / : Cong Y, Kong F, Zhu A, Yan C

EMDB-69359:
Cryo-EM structure of human sodium/proton antiporter NHE1 in complex with Eniporide in an outward-open conformation
Method: single particle / : Cong Y, Kong F, Zhu A, Yan C

EMDB-69360:
Cryo-EM structure of human sodium/proton antiporter NHE1 in complex with Rimeporide in an outward-open conformation
Method: single particle / : Cong Y, Kong F, Zhu A, Yan C

PDB-23xk:
Cryo-EM structure of human sodium/proton antiporter NHE1 in complex with Cariporide in an outward-open conformation
Method: single particle / : Cong Y, Kong F, Zhu A, Yan C

PDB-23xm:
Cryo-EM structure of human sodium/proton antiporter NHE1 in complex with Eniporide in an outward-open conformation
Method: single particle / : Cong Y, Kong F, Zhu A, Yan C

PDB-23xo:
Cryo-EM structure of human sodium/proton antiporter NHE1 in complex with Rimeporide in an outward-open conformation
Method: single particle / : Cong Y, Kong F, Zhu A, Yan C

EMDB-64003:
Structure of glycosylphosphatidylinositol transamidase, state 3, unsharpened map
Method: single particle / : Hua ZK, Ding XY, Zhang M, Liu XT, Zhang MJ, Yu HJ

EMDB-64082:
Cryo-EM structure of human TRPV3 in complex with sevoflurane determined in MSP2N2 nanodisc
Method: single particle / : Lu X, Yao J

EMDB-64000:
Structure of glycosylphosphatidylinositol transamidase,state 1
Method: single particle / : Hua ZK, Ding XY, Zhang M, Liu XT, Zhang MJ, Yu HJ

PDB-9ub7:
Structure of glycosylphosphatidylinositol transamidase,state 1
Method: single particle / : Hua ZK, Ding XY, Zhang M, Liu XT, Zhang MJ, Yu HJ

EMDB-54060:
Cryo-EM structure of the CorM filament in the presence of CorR from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-54061:
Cryo-EM structure of the CorM filament from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-54062:
Cryo-EM structure of the delta1-40 CorM filament from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-55454:
Cryo-electron tomogram of cyanobacterium Anabaena sp. PCC 7120 with putative CorM filaments (Isonet-processed)
Method: electron tomography / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Zens B, Weiss GL, Schur FKM, Loose M

EMDB-55455:
Cryo-electron tomogram of delta-cse mutant cyanobacterium Anabaena sp. PCC 7120 with putative CorM filaments
Method: electron tomography / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Zens B, Weiss GL, Schur FKM, Loose M

PDB-9rmi:
Cryo-EM structure of the CorM filament in the presence of CorR from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-70069:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to FNZ, Global Map
Method: single particle / : Robertson MJ, Skiniotis G

EMDB-70070:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to FNZ- local map
Method: single particle / : Robertson MJ, Skiniotis G

EMDB-75897:
Evaluating the Volta Phase Plate for Improved Tomogram Alignment in Cryo-Electron Tomography: structure of 80S ribosome with VPP (full dataset)
Method: subtomogram averaging / : Hutchings J, Ji D, Ali M, Siems H, Serwas D, Paraan M, Montabana EA, Yu Y

EMDB-75900:
Evaluating the Volta Phase Plate for Improved Tomogram Alignment in Cryo-Electron Tomography: structure of 70S ribosome with VPP (full dataset)
Method: subtomogram averaging / : Hutchings J, Ji D, Ali M, Paraan M, Montabana EA, Yu Y

EMDB-75307:
CRYO-EM STRUCTURE OF THE A149T DIMER VARIANT OF SERINE HYDROXYMETHYLTRANSFERASE 8 FROM SOYBEAN CULTIVAR ESSEX IN COMPLEX WITH PLP
Method: single particle / : Beamer LJ, Samarakoon V, Buckley DP, Owuocha LF, Durie CL, Mitchum MG

PDB-10nm:
CRYO-EM STRUCTURE OF THE A149T DIMER VARIANT OF SERINE HYDROXYMETHYLTRANSFERASE 8 FROM SOYBEAN CULTIVAR ESSEX IN COMPLEX WITH PLP
Method: single particle / : Beamer LJ, Samarakoon V, Buckley DP, Owuocha LF, Durie CL, Mitchum MG

EMDB-54194:
ZZ1-SO2H-induced assembly of the YPEL5-CTLH E3 ligase and BRD4(BD1) neosubstrate
Method: single particle / : Chrustowicz J, Schulman BA

EMDB-54215:
Ternary complex of an improved charged molecular glue degrader ZZ2-SO2H, BRD4(BD1) neosubstrate, and the CTLH E3 ligase receptor module YPEL5-WDR26
Method: single particle / : Chrustowicz J, Schulman BA

EMDB-54216:
Ternary complex of a charged molecular glue degrader ZZ1-SO2H, BRD4(BD1) neosubstrate, and the CTLH E3 ligase receptor module YPEL5-WDR26
Method: single particle / : Chrustowicz J, Schulman BA

EMDB-64001:
Structure of glycosylphosphatidylinositol transamidase,state 1,unsharpened map
Method: single particle / : Hua ZK, Ding XY, Zhang M, Liu XT, Zhang MJ, Yu HJ

EMDB-70024:
Rhesus Macaque mAb CHM-27 complexed with SARS-CoV-2 spike protein
Method: single particle / : Lin RN, Ward AB

EMDB-70025:
Rhesus Macaque mAb CHM-16 complexed with SARS-CoV-2 spike protein
Method: single particle / : Lin RN, Ward AB

EMDB-70026:
Rhesus Macaque DHIK wk40 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more