[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 341 items for (author: homa & fl)

EMDB-54430:
Lectin/toxin 2 from Coprinopsis cinerea
Method: single particle / : Cordara G, Ali Ahmad A, Krengel U

PDB-9s11:
Lectin/toxin 2 from Coprinopsis cinerea
Method: single particle / : Cordara G, Krengel U

EMDB-54384:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54398:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busandiego R

EMDB-54405:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54406:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54407:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54420:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54421:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54422:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54424:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54432:
In situ cryo-electron tomogram of rat hippocampal synapse
Method: electron tomography / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-54447:
Subtomogram average of synaptic microtubule from rat hippocampal neurons
Method: subtomogram averaging / : Petrovic A, Do TT, Siegert A, Fernandez-Busnadiego R

EMDB-70233:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70234:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-70235:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70236:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8q:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8r:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8s:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8t:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-52570:
Cryo-EM structure of mouse RNF213 (WB3/WB4 + ATP)
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

EMDB-52571:
Cryo-EM structure of mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized, and ATPgS
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

PDB-9i1i:
Cryo-EM structure of mouse RNF213 (WB3/WB4 + ATP)
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

PDB-9i1j:
Cryo-EM structure of mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized, and ATPgS
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

EMDB-54486:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor (unbudded region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54487:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor(bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54489:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54497:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-53068:
Cryo-EM map of P. furiosus 70S grown at 95 degrees
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53069:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53070:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53071:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53072:
Consensus cryo-EM map of P furiosus 70S grown at 102degC
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53073:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53074:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53076:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53077:
Consensus cryo-EM map of P. furiosus 70S in RsmB deleted strain
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53078:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53079:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53080:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more