[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 109 items for (author: heide & f)

EMDB-48922:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

PDB-9n5i:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

EMDB-48921:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-48924:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

EMDB-48941:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5h:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5k:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

PDB-9n5o:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-48523:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9mqg:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44341:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44342:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8b:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8c:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-51514:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 without any binding partner.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-51515:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 engaged to MIA40.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-51516:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gqy:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 without any binding partner.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gqz:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 engaged to MIA40.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gr0:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-48798:
PP2A-B55 Holoenzyme with Eya3
Method: single particle / : Shi S, Alderman C, Huang W, Zhao R

EMDB-48799:
PP2A-B55 Holoenzyme with B55i
Method: single particle / : Shi S, Alderman C, Huang W, Zhao R

PDB-9n0y:
PP2A-B55 Holoenzyme with Eya3
Method: single particle / : Shi S, Li X, Alderman C, Zhao R

PDB-9n0z:
PP2A-B55 Holoenzyme with B55i
Method: single particle / : Shi S, Li X, Alderman C, Zhao R

EMDB-42049:
Cryo-EM Structure of FBOX22-BACH1BTB
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42051:
Cryo-EM Structure of SCF-FBOX22-BACH1BTB
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42064:
Structure of BACH1 BTB domain-bound FBXL17 ubiquitin ligase
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42102:
Structure of SCF-FBXL17-BACH1BTB E3 ligase complex
Method: single particle / : Shi H, Cao S

EMDB-42105:
Cryo-EM structure of dimeric SCF-FBXL17-BACH1BTB E3 ligase complex close conformation
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42106:
Cryo-EM structure of dimeric FBXL17-BACH1BTB E3 ubiquitin ligase complex
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42115:
Cryo-EM structure of dimeric SCF-FBXL17-BACH1BTB open conformation
Method: single particle / : Shi H, Cao S, Zheng N

PDB-8ua3:
Cryo-EM Structure of FBOX22-BACH1BTB
Method: single particle / : Shi H, Cao S, Zheng N

PDB-8ua6:
Cryo-EM Structure of SCF-FBOX22-BACH1BTB
Method: single particle / : Shi H, Cao S, Zheng N

PDB-8uah:
Structure of BACH1 BTB domain-bound FBXL17 ubiquitin ligase
Method: single particle / : Shi H, Cao S, Zheng N

PDB-8ubt:
Structure of SCF-FBXL17-BACH1BTB E3 ligase complex
Method: single particle / : Shi H, Cao S

PDB-8ubu:
Cryo-EM structure of dimeric SCF-FBXL17-BACH1BTB E3 ligase complex close conformation
Method: single particle / : Shi H, Cao S, Zheng N

PDB-8ubv:
Cryo-EM structure of dimeric FBXL17-BACH1BTB E3 ubiquitin ligase complex
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-41024:
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41025:
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41026:
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41027:
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41034:
MD64 N332-GT5 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41035:
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t49:
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4a:
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4b:
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4d:
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4k:
MD64 N332-GT5 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4l:
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-17429:
FAD_ox bound dark state structure of PdLCry
Method: single particle / : Behrmann E, Behrmann H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more