[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 181 items for (author: hass & pe)

EMDB-53567:
An auto inhibitory loop in the MiDAC histone deacetylase complex
Method: single particle / : Fairall L, Schwabe JWR

PDB-9r4i:
An auto inhibitory loop in the MiDAC histone deacetylase complex
Method: single particle / : Fairall L, Schwabe JWR

EMDB-55171:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State I)
Method: single particle / : Hassan AH, Demo G

EMDB-55173:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State II)
Method: single particle / : Hassan AH, Demo G

EMDB-55174:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State III)
Method: single particle / : Hassan AH, Demo G

EMDB-55176:
pre-50S ribosomal subunit in rimM-KO with RsfS (-H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55177:
50S ribosomal subunit in rimM-KO with RsfS (+H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55178:
70S ribosome from RimM-KO
Method: single particle / : Hassan AH, Demo G

EMDB-55181:
30S ribosomal subunit RimM-WT with IF1 and IF3
Method: single particle / : Hassan AH, Demo G

EMDB-55182:
pre-50S ribosomal subunit from RimM-WT with RsfS (-H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55183:
50S ribosomal subunit from RimM-WT with RsfS (+H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55185:
70S ribosome from RimM-WT
Method: single particle / : Hassan AH, Demo G

PDB-9ss0:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State I)
Method: single particle / : Hassan AH, Demo G

PDB-9ss1:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State II)
Method: single particle / : Hassan AH, Demo G

PDB-9ss2:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State III)
Method: single particle / : Hassan AH, Demo G

PDB-9ss4:
pre-50S ribosomal subunit in rimM-KO with RsfS (-H68)
Method: single particle / : Hassan AH, Demo G

PDB-9ss5:
50S ribosomal subunit in rimM-KO with RsfS (+H68)
Method: single particle / : Hassan AH, Demo G

PDB-9ss6:
70S ribosome from RimM-KO
Method: single particle / : Hassan AH, Demo G

EMDB-45190:
Yersinia entomophaga holotoxin complex in prepore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-45422:
Yersinia entomophaga holotoxin complex in pore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-45423:
Yersinia entomophaga toxin complex TcA subunit
Method: single particle / : Low YS, Landsberg MJ

PDB-9c4k:
Yersinia entomophaga holotoxin complex in prepore conformation
Method: single particle / : Low YS, Landsberg MJ

PDB-9cbc:
Yersinia entomophaga holotoxin complex in pore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-52019:
Structure of A16/G9 in complex with A56/K2 (vaccinia virus)
Method: single particle / : Vernuccio R, Meola A, Guardado-Calvo P

EMDB-53936:
Structure of A16/G9 in complex with A56/K2 at pH 5.5 (vaccinia virus)
Method: single particle / : Vernuccio R, Battini L, Meola A, Guardado-Calvo P

PDB-9hbk:
Structure of A16/G9 in complex with A56/K2 (vaccinia virus)
Method: single particle / : Vernuccio R, Meola A, Guardado-Calvo P

PDB-9rdh:
Structure of A16/G9 in complex with A56/K2 at pH 5.5 (vaccinia virus)
Method: single particle / : Vernuccio R, Battini L, Meola A, Guardado-Calvo P

EMDB-49728:
TMPRSS6 in complex with REGN7999 Fab and REGN8023 Fab
Method: single particle / : Saotome K, Franklin MC

PDB-9nrc:
TMPRSS6 in complex with REGN7999 Fab and REGN8023 Fab
Method: single particle / : Saotome K, Franklin MC

EMDB-50935:
Cryo electron tomogram of Streptomyces coelicolor - ScoDelta4242 membrane protein CisA mutant - Intact hyphae
Method: electron tomography / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-50939:
Cryo electron tomogram of Streptomyces coelicolor - ScoDelta4242 membrane protein CisA mutant - Ghost cells
Method: electron tomography / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-50940:
Cryo electron tomogram of Streptomyces coelicolor - ScoDelta4242 complemented membrane protein CisA strain - Intact hyphae
Method: electron tomography / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-50944:
Cryo electron tomogram of Streptomyces coelicolor - ScoDelta4242 complemented membrane protein CisA strain - Ghost cells
Method: electron tomography / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-50948:
Cryo electron tomogram of Streptomyces coelicolor - Intact hyphae
Method: electron tomography / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-50949:
Cryo electron tomogram of Streptomyces coelicolor - Ghost cells
Method: electron tomography / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-51565:
Cryo-EM structure of a contractile injection system in Streptomyces coelicolor, the baseplate complex in extended state applied 3-fold symmetry.
Method: single particle / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-51566:
Cryo-EM structure of a contractile injection system in Streptomyces coelicolor, the cap portion in extended state.
Method: single particle / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

PDB-9gtr:
Cryo-EM structure of a contractile injection system in Streptomyces coelicolor, the baseplate complex in extended state applied 3-fold symmetry.
Method: single particle / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

PDB-9gts:
Cryo-EM structure of a contractile injection system in Streptomyces coelicolor, the cap portion in extended state.
Method: single particle / : Casu B, Sallmen JW, Hass PE, Afanasyev P, Xu J, Schlimpert S, Pilhofer M

EMDB-45105:
Cryo-electron tomography of Candida glabrata plasma membrane
Method: electron tomography / : Jiang J, Keniya MV, Perlin DS, Dai W

EMDB-45106:
Cryo-electron tomography of plasma membranes generated from caspofungin-treated Candida glabrata spheroplasts
Method: electron tomography / : Jiang J, Keniya MV, Perlin DS, Dai W

EMDB-48856:
70S Ribosome of Goslar infected WT E. coli
Method: subtomogram averaging / : Klusch N, Villa E

EMDB-48875:
70S Ribosome of Goslar infected chmA KD E. coli
Method: subtomogram averaging / : Hutchings J, Rodriguez ZK, Klusch N, Villa E

EMDB-48876:
70S Ribosome of Goslar infected chmA KD E. coli
Method: subtomogram averaging / : Hutchings J, Rodriguez ZK, Klusch N, Villa E

EMDB-49120:
In situ cryoET of an EPI vesicle in a Goslar infected chmA KD E. coli cell 90 mpi
Method: electron tomography / : Hutchings J, Rodriguez ZK, Klusch N, Villa E

EMDB-49121:
In situ cryoET of an EPI vesicle in a Goslar infected chmA KD E. coli cell 90 mpi
Method: electron tomography / : Hutchings J, Rodriguez ZK, Klusch N, Villa E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more