[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 799 items for (author: han & sj)

EMDB-72969:
AJ09-21 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72970:
AJ09-83 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72971:
AJ09-110 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72973:
AM12-347 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72985:
AM12-351 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72986:
AM12-352 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72987:
NN39-25 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72988:
NN39-171 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72989:
V634-136 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72990:
V634-136 UCA Fab in complex with HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72991:
V645-158 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72992:
HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72993:
HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72994:
HIV-1 Env del8-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-69767:
Nerearchaeum marumarumayae interaction with gram negative bacterium
Method: electron tomography / : Johnson MD, Shepherd DC, Ghosal D

EMDB-69768:
Large cell body of Nerearchaeum marumarumayae
Method: electron tomography / : Johnson MD, Shepherd DC, Ghosal D

EMDB-69769:
Extended cell phenotype of Nerearchaeum marumarumayae
Method: electron tomography / : Johnson MD, Shepherd DC, Ghosal D

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-56033:
CryoEM structure of coxsackievirus B1 virus-like particle with VP4 deletion
Method: single particle / : Levanova AL, Guryanov S, Ahmad KLL, Butcher SJ

EMDB-56582:
XBP1u-stalled RPL4 RNC in complex with NAC (locally refined on 40S body)
Method: single particle / : Predin M, Jang J, Ban N

EMDB-56583:
XBP1u-stalled RPL4 RNC in complex with NAC (locally refined on 40S head)
Method: single particle / : Predin M, Jang J, Ban N

EMDB-53529:
Cytochrome bd II oxidase qOR-2 type from Mycobacterium smegmatis
Method: single particle / : Kovalova T, Janczak M, Adelroth P, Hogbom M

PDB-9r2g:
Cytochrome bd II oxidase qOR-2 type from Mycobacterium smegmatis
Method: single particle / : Kovalova T, Janczak M, Adelroth P, Hogbom M

EMDB-53847:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

PDB-9r90:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

EMDB-49835:
SARS-CoV-2 BA.1 S6P (HexaPro) + COV2-3835 Fab Local Refinement Map (RBD + Fv)
Method: single particle / : Ramamohan AR, Johnson NV, McLellan JS

EMDB-70223:
Cryo-EM structure of primidone-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-56129:
Octameric C. elegans BORC, containing BORCS5, BORCS6, BORCS7, BORCS8, KXD1 and the shared BORC and BLoC-1 subunits, BLOC1S1, BLOC1S2 and Snapin
Method: single particle / : Amann SJ, de Araujo MEG, Grishkovskaya I, Huber LA, Haselbach D

EMDB-45190:
Yersinia entomophaga holotoxin complex in prepore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-45422:
Yersinia entomophaga holotoxin complex in pore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-45423:
Yersinia entomophaga toxin complex TcA subunit
Method: single particle / : Low YS, Landsberg MJ

EMDB-48812:
Cryo-EM structure of rabbit TRPM3 in apo resting state at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48813:
Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 in resting state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48814:
Cryo-EM structure of rabbit TRPM3 in apo activated state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48815:
Cryo-EM structure of rabbit TRPM3 in apo activated state at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48816:
Cryo-EM structure of rabbit TRPM3 in complex with primidone in resting state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48817:
Cryo-EM structure of rabbit TRPM3 in complex with primidone in activated state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48819:
Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 in activated state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48877:
Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70209:
Cryo-EM structure of apo rabbit TRPM3 having 3 resting and 1 activated subunits at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70210:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70211:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70212:
Cryo-EM structure of apo rabbit TRPM3 having 1 resting and 3 activated subunits at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70213:
Cryo-EM structure of apo rabbit TRPM3 having 3 resting and 1 activated subunits at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70214:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70215:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70216:
Cryo-EM structure of apo rabbit TRPM3 having 1 resting and 3 activated subunits at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70218:
Cryo-EM structure of CIM0216-bound rabbit TRPM3 having 3 resting and 1 activated subunits at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70219:
Cryo-EM structure of CIM0216-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more