[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 287 items for (author: greber & b)

EMDB-56544:
Cryo-EM structure of the human holo-TFIIH and XPC initial encounter complex
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

EMDB-56551:
Cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA (composite map)
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

EMDB-56553:
Multi-body refinement component 1 of the cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

EMDB-56566:
Cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA (consensus map)
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

EMDB-56568:
Multi-body refinement component 2 of the cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

EMDB-56572:
Multi-body refinement component 3 of the cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

EMDB-56573:
Cryo-EM structure of the human holo-TFIIH-XPC-XPA complex bound to bulky lesion-mimic DNA
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

PDB-28jm:
Cryo-EM structure of the human holo-TFIIH and XPC initial encounter complex
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

PDB-28js:
Cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA (composite map)
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

PDB-28jv:
Cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA (consensus map)
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

PDB-28ke:
Cryo-EM structure of the human holo-TFIIH-XPC-XPA complex bound to bulky lesion-mimic DNA
Method: single particle / : de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

EMDB-53204:
Cryo-EM structure of CDK2-cyclin A bound to OTS964
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-53205:
Cryo-EM structure of the human CAK bound to OTS964
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-53221:
Cryo-EM structure of the CDK11B-cyclin L2-SAP30BP bound to OTS964 (conformation 1)
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-53224:
Cryo-EM structure of CDK11B-cyclin L2-SAP30BP bound to AMP-PNP
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

PDB-9qjj:
Cryo-EM structure of CDK2-cyclin A bound to OTS964
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

PDB-9qjn:
Cryo-EM structure of the human CAK bound to OTS964
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

PDB-9qkt:
Cryo-EM structure of the CDK11B-cyclin L2-SAP30BP bound to OTS964 (conformation 1)
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

PDB-9qkz:
Cryo-EM structure of CDK11B-cyclin L2-SAP30BP bound to AMP-PNP
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

PDB-9ql1:
Cryo-EM structure of the CDK11B-cyclin L2-SAP30BP bound to OTS964 (conformation 2)
Method: single particle / : McGeoch AJS, Cushing VI, Cronin NB, Alfieri C, Greber BJ

EMDB-53054:
Cryo-EM structure of the XPF-ERCC1-XPA complex
Method: single particle / : Feng J, Cronin NB, Greber BJ

EMDB-53055:
Cryo-EM structure of the XPF-ERCC1-SLX4(330-555)-SLX4IP complex
Method: single particle / : Feng J, Cronin NB, Greber BJ

EMDB-53058:
Cryo-EM structure of a DNA-bound XPF-ERCC1-SLX4(330-555)-SLX4IP complex
Method: single particle / : Feng J, Matthews-Palmer T, Greber BJ

EMDB-53059:
Cryo-EM map of apo-XPF-ERCC1-SLX4(330-555)-SLX4IP from a DNA-containing sample.
Method: single particle / : Feng J, Matthews-Palmer T, Greber BJ

EMDB-53061:
Cryo-EM map of the XPF-ERCC1-SLX4IP complex.
Method: single particle / : Feng J, Greber BJ

PDB-9qec:
Cryo-EM structure of the XPF-ERCC1-XPA complex
Method: single particle / : Feng J, Cronin NB, Greber BJ

PDB-9qed:
Cryo-EM structure of the XPF-ERCC1-SLX4(330-555)-SLX4IP complex
Method: single particle / : Feng J, Cronin NB, Greber BJ

PDB-9qee:
Cryo-EM structure of a DNA-bound XPF-ERCC1-SLX4(330-555)-SLX4IP complex
Method: single particle / : Feng J, Matthews-Palmer T, Greber BJ

EMDB-52758:
Cryo-EM structure of CAK-CDK11
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-52759:
Cryo-EM structure of CAK-CDK2-cyclin A2 bound to AMP-PNP (locally refined map)
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-52760:
Cryo-EM structure of CAK-CDK2 (determined in the presence of ADP-nitrate)
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-52761:
Cryo-EM structure of CAK-CDK2 (determined in the presence of ADP-AlFx)
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-53027:
Cryo-EM structure of CAK-CDK2-cyclin A2 bound to AMP-PNP
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-53028:
Cryo-EM structure of apo-CAK-CDK2-cyclin A2
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-54971:
Cryo-EM structure of CAK-CDK1-cyclin B1
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J, Davey NE, Williams SL

PDB-9i9i:
Cryo-EM structure of CAK-CDK11
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

PDB-9i9j:
Cryo-EM structure of CAK-CDK2 (determined in the presence of ADP-nitrate)
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

PDB-9i9k:
Cryo-EM structure of CAK-CDK2 (determined in the presence of ADP-AlFx)
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

PDB-9qcv:
Cryo-EM structure of CAK-CDK2-cyclin A2 bound to AMP-PNP
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

PDB-9qcx:
Cryo-EM structure of apo-CAK-CDK2-cyclin A2
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

PDB-9skq:
Cryo-EM structure of CAK-CDK1-cyclin B1
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J, Davey NE, Williams SL

EMDB-52201:
Cryo-EM structure of CDK2-cyclin A bound to a GMNC peptide
Method: single particle / : de Martin Garrido N, Ord M, Cushing VI, Greber BJ, Pryciak PM, Davey NE

EMDB-52204:
Cryo-EM structure of CDK2-cyclin A bound to a SAMHD1 peptide
Method: single particle / : de Martin Garrido N, Ord M, Cushing VI, Greber BJ, Pryciak PM, Davey NE

EMDB-52208:
Cryo-EM structure of CDK2-cyclin A bound to a SCAPER peptide
Method: single particle / : de Martin Garrido N, Ord M, Cushing VI, Greber BJ, Pryciak PM, Davey NE

PDB-9hiu:
Cryo-EM structure of CDK2-cyclin A bound to a GMNC peptide
Method: single particle / : de Martin Garrido N, Ord M, Cushing VI, Greber BJ, Pryciak PM, Davey NE

PDB-9hiw:
Cryo-EM structure of CDK2-cyclin A bound to a SAMHD1 peptide
Method: single particle / : de Martin Garrido N, Ord M, Cushing VI, Greber BJ, Pryciak PM, Davey NE

PDB-9hj1:
Cryo-EM structure of CDK2-cyclin A bound to a SCAPER peptide
Method: single particle / : de Martin Garrido N, Ord M, Cushing VI, Greber BJ, Pryciak PM, Davey NE

EMDB-52205:
Cryo-EM structure of CAK (CDK7 D97N mutant) in complex with THZ1
Method: single particle / : Cushing VI, Greber BJ, Ali S, Lai CF, Bevan CL, Coombes RC, Buluwela L

EMDB-52206:
Cryo-EM structure of CAK (CDK7 D97N mutant) in complex with ATPgS
Method: single particle / : Cushing VI, Greber BJ, Ali S, Lai CF, Bevan CL, Coombes RC, Buluwela L

EMDB-52207:
Cryo-EM structure of CAK (CDK7 D97N mutant) in complex with Samuraciclib
Method: single particle / : Cushing VI, Greber BJ, Ali S, Lai CF, Bevan CL, Coombes RC, Buluwela L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more