[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,477 items for (author: gan & b)

EMDB-76463:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76464:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76465:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iy:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iz:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12ja:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-73877:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73882:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73883:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7q:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7v:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7x:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-72526:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

PDB-9y61:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

EMDB-72520:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72521:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72522:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72523:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5r:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5s:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5t:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5u:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-58347:
C. difficile phage phiCD508 tail tube in spontaneously contracted state
Method: helical / : Bullough PA, Wilson JS, Berry HL, Fagan RP

EMDB-58348:
C. difficile phage phiCD508 tail sheath in spontaneously contracted state
Method: helical / : Bullough PA, Wilson JS, Berry HL, Fagan RP

EMDB-58350:
Extended tail of C. difficile phage phiCD508 subjected to 3D variability analysis
Method: helical / : Bullough PA, Wilson JS, Berry HL, Fagan RP

PDB-31es:
C. difficile phage phiCD508 tail tube in spontaneously contracted state
Method: helical / : Bullough PA, Wilson JS, Berry HL, Fagan RP

PDB-31eu:
C. difficile phage phiCD508 tail sheath in spontaneously contracted state
Method: helical / : Bullough PA, Wilson JS, Berry HL, Fagan RP

PDB-31ev:
Extended tail of C. difficile phage phiCD508 subjected to 3D variability analysis
Method: helical / : Bullough PA, Wilson JS, Berry HL, Fagan RP

EMDB-54704:
Structure of Yeast RNA polymerase II elongation complex apo-state-I
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-54705:
CryoEM map of Yeast RNA polymerase II elongation complex apo-state-I-A
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-54706:
CryoEM map of Yeast RNA polymerase II elongation complex apo-state-I-B
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-54709:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-A
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-54711:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-C
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

PDB-9say:
Structure of Yeast RNA polymerase II elongation complex apo-state-I
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

PDB-9sb1:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-A
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

PDB-9sb3:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-C
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-64749:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 in the Apo state
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

EMDB-64751:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to EP54
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

EMDB-64752:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to C5a
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

EMDB-64761:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to C5a-pep
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

EMDB-64777:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to R8Y
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

EMDB-65890:
Structure of mC5aR2 in complex with mC5a-desArg
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

EMDB-80132:
Structure of mC5aR2 in complex with mC5a-desArg (Monomer)
Method: single particle / : Tiwari D, Ganguly M, Banerjee R, Shukla AK, Mishra S, Dalal A, Nureki O

PDB-25if:
Structure of mC5aR2 in complex with mC5a-desArg (Monomer)
Method: single particle / : Tiwari D, Ganguly M, Banerjee R, Shukla AK

PDB-9v35:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 in the Apo state
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

PDB-9v38:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to EP54
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

PDB-9v3c:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to C5a
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

PDB-9v3y:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to C5a-pep
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

PDB-9v4d:
Structure of C5a anaphylatoxin chemotactic receptor 2, C5aR2 bound to R8Y
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

PDB-9wdi:
Structure of mC5aR2 in complex with mC5a-desArg
Method: single particle / : Tiwari D, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Banerjee R, Nureki O, Shukla AK

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more