[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,080 items for (author: fu & j)

EMDB-81330:
Dictyostelium discoideum cytoplasmic dynein motor domain in complex with ADP.Vi (Phi-particle)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

EMDB-81335:
Dictyostelium discoideum cytoplasmic dynein motor domain in the presence of ADP (ADP state 1)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

EMDB-81336:
Dictyostelium discoideum cytoplasmic dynein motor domain in the presence of ADP (ADP state 2)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

EMDB-81337:
Dictyostelium discoideum cytoplasmic dynein motor domain in the presence of ADP (Apo state 1)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

EMDB-81338:
Dictyostelium discoideum cytoplasmic dynein motor domain in the absence of nucleotide (Apo state 2)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

PDB-27pt:
Dictyostelium discoideum cytoplasmic dynein motor domain in complex with ADP.Vi (Phi-particle)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

PDB-27py:
Dictyostelium discoideum cytoplasmic dynein motor domain in the presence of ADP (ADP state 1)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

PDB-27pz:
Dictyostelium discoideum cytoplasmic dynein motor domain in the presence of ADP (ADP state 2)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

PDB-27qa:
Dictyostelium discoideum cytoplasmic dynein motor domain in the presence of ADP (Apo state 1)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

PDB-27qb:
Dictyostelium discoideum cytoplasmic dynein motor domain in the absence of nucleotide (Apo state 2)
Method: single particle / : Shimo-Kon R, Tokita H, Imai H, Maeshima T, Kon T

EMDB-49194:
Monomeric AVAST5 binds a SIR2 domain
Method: single particle / : Xie J, Wang C, Fu TM

PDB-9nah:
Monomeric AVAST5 binds a SIR2 domain
Method: single particle / : Xie J, Wang C, Fu TM

EMDB-65915:
Cryo-EM structure of AtABCC2 in ATP-bound, outward-facing state
Method: single particle / : Dong J, Yang TL, Lin HY, Yang GF

PDB-9wet:
Cryo-EM structure of AtABCC2 in ATP-bound, outward-facing state
Method: single particle / : Dong J, Yang TL, Lin HY, Yang GF

EMDB-52705:
Cryo-EM structure of PSII intermediate Psb27-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

EMDB-52706:
Cryo-EM structure of PSII intermediate Psb32-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

PDB-9i82:
Cryo-EM structure of PSII intermediate Psb27-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

PDB-9i83:
Cryo-EM structure of PSII intermediate Psb32-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

EMDB-63507:
Cryo-EM structure of the chromatin remodeler Rad26 N-terminal deletion mutant bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Haruhiko E, Sekine S, Kagawa W, Kurumizaka H

EMDB-54659:
Cryo-EM structure of Rat NHE6 D293A variant
Method: single particle / : Jung S, Gulati A, Reichenbach T, Kokane S, Yeo H, Drew D

EMDB-54660:
Cryo-EM structure of Rat NHE6 in detergent
Method: single particle / : Yeo H, Jung S, Reichenbach T, Kokane S, Gulati A, Drew D

EMDB-54661:
Cryo-EM structure of Rat NHE6 in nanodisc
Method: single particle / : Yeo H, Jung S, Reichenbach T, Kokane S, Gulati A, Drew D

EMDB-54662:
Cryo-EM structure of Rat NHE6 K351A variant
Method: single particle / : Jung S, Kokane S, Reichenbach T, Yeo H, Gulati A, Drew D

PDB-9s8c:
Cryo-EM structure of Rat NHE6 D293A variant
Method: single particle / : Jung S, Gulati A, Reichenbach T, Kokane S, Yeo H, Drew D

PDB-9s8d:
Cryo-EM structure of Rat NHE6 in detergent
Method: single particle / : Yeo H, Jung S, Reichenbach T, Kokane S, Gulati A, Drew D

PDB-9s8e:
Cryo-EM structure of Rat NHE6 in nanodisc
Method: single particle / : Yeo H, Jung S, Reichenbach T, Kokane S, Gulati A, Drew D

PDB-9s8g:
Cryo-EM structure of Rat NHE6 K351A variant
Method: single particle / : Jung S, Kokane S, Reichenbach T, Yeo H, Gulati A, Drew D

EMDB-72277:
Cryo-EM map of Plasmodium falciparum 20S proteasome bound to an asparagine-ethylenediamine based inhibitor TDI6245
Method: single particle / : Hsu HC, Li H

PDB-9q6f:
Structure of Plasmodium falciparum 20S proteasome bound to an asparagine-ethylenediamine based inhibitor TDI6245
Method: single particle / : Hsu HC, Li H

EMDB-63262:
Cryo-EM structure of the chromatin remodeler Rad26 bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Kagawa W, Kurumizaka H

PDB-9lox:
Cryo-EM structure of the chromatin remodeler Rad26 bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Kagawa W, Kurumizaka H

EMDB-75979:
Cryo-EM structure of human exportin-1 conjugated with FR-027*
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-11rm:
Cryo-EM structure of human exportin-1 conjugated with FR-027*
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-75163:
Yeast Blm10 apo Structure
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

EMDB-75294:
C2 symmetry expanded and subtracted 20S Proteasome, Blm10, Fub1 Complex Halfmer
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

EMDB-75334:
20S Alpha 3 Deletion proteasome core particle in complex with Fub1 and Blm10
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

EMDB-75393:
C2 expanded and subtracted 20S Alpha 3 Deletion proteasome core particle in complex with Blm10, Halfmer
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

EMDB-75436:
20S Alpha 3 Deletion proteasome core particle in complex with Blm10
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

PDB-10gx:
Yeast Blm10 apo Structure
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

PDB-10mt:
C2 symmetry expanded and subtracted 20S Proteasome, Blm10, Fub1 Complex Halfmer
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

PDB-10og:
20S Alpha 3 Deletion proteasome core particle in complex with Fub1 and Blm10
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

PDB-10qt:
C2 expanded and subtracted 20S Alpha 3 Deletion proteasome core particle in complex with Blm10, Halfmer
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

PDB-10sj:
20S Alpha 3 Deletion proteasome core particle in complex with Blm10
Method: single particle / : Walsh Jr RM, Rawson S, Fermin Perez E, Venclovaite U, Hanna J

EMDB-55789:
Structure of vaccine candidate AHSV-4 VP2 DI-mi3 nanoparticle
Method: single particle / : Martinez-Castillo A, Aebischer A, Fu L, Breard E, Zientara S, Kortekaas J, Beer M, Abrescia NGA

EMDB-55790:
African Horse Sickness Virus serotype 4 VP2 homotrimer
Method: single particle / : Martinez-Castillo A, Aebischer A, Fu L, Breard E, Zientara S, Kortekaas J, Beer M, Abrescia NGA

PDB-9tcc:
African Horse Sickness Virus serotype 4 VP2 homotrimer
Method: single particle / : Martinez-Castillo A, Aebischer A, Fu L, Breard E, Zientara S, Kortekaas J, Beer M, Abrescia NGA

EMDB-80928:
Local refinement of the mpox virus A35R protein in complexed with 17H1 Fab
Method: single particle / : Xiao YX, He MZ

PDB-26wc:
Local refinement of the mpox virus A35R protein in complexed with 17H1 Fab
Method: single particle / : Xiao YX, He MZ

EMDB-65593:
Cryo-EM structure of vanadate-trapped LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w37:
Cryo-EM structure of vanadate-trapped LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more