[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 333 items for (author: fischer & n)

EMDB-18675:
Cryo-ET of cryo-FIB milled Ebola virus infected Huh7 cells at 22 hours post infection.
Method: electron tomography / : Vallbracht M, Chlanda P

EMDB-18676:
Cryo-ET of cryo-FIB milled Ebola virus infected Huh7 cells at 22 hours post infection
Method: electron tomography / : Vallbracht M, Chlanda P

EMDB-18678:
Cryo-ET of cryo-FIB milled Ebola virus infected Huh7 cells at 14 hours post infection
Method: electron tomography / : Vallbracht M, Chlanda P

EMDB-18679:
Cryo-ET of cryo-FIB milled of Huh7 cells transfected with Ebola virus proteins NP, VP35, L, VP30-GFP vitrified at 28 hours post transfection
Method: electron tomography / : Vallbracht M, Chlanda P

EMDB-18686:
Cryo-ET of cryo-FIB milled of Huh7 cells transfected with Ebola virus proteins NP, VP35, L, VP30-GFP, VP40 and VP24 vitrified at 28 hours post transfection
Method: electron tomography / : Vallbracht M, Bodmer B, Fischer K, Makroczyova J, Winter S, Wachsmuth-Melm M, Hoenen T, Chlanda P

EMDB-18690:
Cryo-ET of cryo-FIB milled Ebola virus-VP30-GFP infected Huh7 cells at 14 hours post infection
Method: electron tomography / : Vallbracht M, Chlanda P

EMDB-18695:
Cryo-ET of cryo-FIB milled Ebola virus-VP30-GFP infected Huh7 cells at 22 hours post infection
Method: electron tomography / : Vallbracht M, Chlanda P

EMDB-18696:
Cryo-ET of cryo-FIB milled Ebola virus infected Huh7 cells at 14 hours post infection
Method: electron tomography / : Vallbracht M, Chlanda P

EMDB-41346:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41359:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41360:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41361:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41362:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tkc:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl2:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl3:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl4:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl5:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-17696:
Structure of human 48S translation initiation complex in open codon scanning state (48S-1)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17697:
Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17698:
Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17699:
Structure of human 48S translation initiation complex after eIF5 release (48S-4)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17700:
Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17701:
Structure of human 48S translation initiation complex with initiator tRNA, eIF1A and eIF3 (off-pathway)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-19128:
Structure of human eIF3 core from closed 48S translation initiation complex
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

PDB-8pj1:
Structure of human 48S translation initiation complex in open codon scanning state (48S-1)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

PDB-8pj2:
Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

PDB-8pj3:
Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

PDB-8pj4:
Structure of human 48S translation initiation complex after eIF5 release (48S-4)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

PDB-8pj5:
Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

PDB-8pj6:
Structure of human 48S translation initiation complex with initiator tRNA, eIF1A and eIF3 (off-pathway)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

PDB-8rg0:
Structure of human eIF3 core from closed 48S translation initiation complex
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-41438:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

PDB-8to7:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

EMDB-41309:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Morano NC, Hoyt F, Hansen B, Fischer E, Shapiro L

PDB-8tjr:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Morano NC, Hoyt F, Hansen B, Fischer E, Shapiro L

EMDB-44389:
Cryo-EM structure of the ZBTB5 BTB domain filament
Method: single particle / : Park J, Hunkeler M, Fischer ES

EMDB-44391:
Cryo-EM structure of the ZBTB9 BTB domain filament
Method: helical / : Park J, Hunkeler M, Fischer ES

PDB-9b9r:
Cryo-EM structure of the ZBTB5 BTB domain filament
Method: single particle / : Park J, Hunkeler M, Fischer ES

PDB-9b9v:
Cryo-EM structure of the ZBTB9 BTB domain filament
Method: helical / : Park J, Hunkeler M, Fischer ES

EMDB-17334:
Cryo EM map of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target)
Method: single particle / : Grimm C, Jungwirth S, Fischer U

EMDB-17335:
Cryo EM map of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex, module 2 of capping enzyme mobile
Method: single particle / : Grimm C, Jungwirth S, Fischer U

EMDB-17336:
Cryo EM map of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex shallow conformation
Method: single particle / : Grimm C, Jungwirth S, Fischer U

PDB-8p0j:
Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex
Method: single particle / : Grimm C, Jungwirth S, Fischer U

PDB-8p0k:
Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex, module 2 of capping enzyme mobile
Method: single particle / : Grimm C, Jungwirth S, Fischer U

PDB-8p0n:
Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex shallow conformation
Method: single particle / : Grimm C, Jungwirth S, Fischer U

EMDB-18134:
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Method: single particle / : Burmeister WP, Ballandras-Colas A, Boettcher B, Grimm C

PDB-8q3r:
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Method: single particle / : Burmeister WP, Ballandras-Colas A, Boettcher B, Grimm C

EMDB-41363:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

PDB-8tl6:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more