[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 816 items for (author: fernandez & j)

EMDB-71307:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-71308:
eN49P7-FRv1-23 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-74399:
Cryo-EM structure of hepatic amyloid fibril from a variant ATTRV122delta, single filament morphology
Method: helical / : Nguyen BA, Ahmed Y, Saelices L

PDB-9zld:
Cryo-EM structure of hepatic amyloid fibril from a variant ATTRV122delta, single filament morphology
Method: helical / : Nguyen BA, Ahmed Y, Saelices L

EMDB-71896:
Cryo-EM structure of cardiac amyloid fibril from a variant apolipoprotein A-I L90P amyloidosis patient
Method: helical / : Nguyen BA, Saelices L

EMDB-71897:
Cryo-EM structure of cardiac amyloid fibril from a variant apolipoprotein A-I R173P amyloidosis patient
Method: helical / : Nguyen BA, Saelices L

EMDB-71898:
Cryo-EM structure of renal amyloid fibril from a variant apolipoprotein A-I R173P amyloidosis patient
Method: helical / : Nguyen BA, Saelices L

PDB-9pvy:
Cryo-EM structure of cardiac amyloid fibril from a variant apolipoprotein A-I L90P amyloidosis patient
Method: helical / : Nguyen BA, Saelices L

PDB-9pvz:
Cryo-EM structure of cardiac amyloid fibril from a variant apolipoprotein A-I R173P amyloidosis patient
Method: helical / : Nguyen BA, Saelices L

PDB-9pw3:
Cryo-EM structure of renal amyloid fibril from a variant apolipoprotein A-I R173P amyloidosis patient
Method: helical / : Nguyen BA, Saelices L

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-55572:
Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex
Method: single particle / : Fernandez Carrera J, Pelea O, Gerecke SE, Chanez C, Jinek M

PDB-9t56:
Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex
Method: single particle / : Fernandez Carrera J, Pelea O, Gerecke SE, Chanez C, Jinek M

EMDB-49520:
Focused refinement of the prefusion F glycoprotein ectodomain of Nipah virus in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-70233:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70234:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-70235:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70236:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-71884:
10E8-GT10.2 immunogen in complex with mouse Fab W6-10 and rhesus macaque Fab W10-09
Method: single particle / : Huang J, Ward AB

EMDB-71885:
10E8-GT10.2 immunogen in complex with Rhesus macaque Fab W3-02 and mouse Fab W6-03
Method: single particle / : Huang J, Ward AB

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54898:
ATP-bound human mitochondrial Hsp60-Hsp10 football complex (D7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54899:
ATP-bound human mitochondrial Hsp60-Hsp10 bullet complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54900:
ATP-bound human mitochondrial Hsp60-Hsp10 half-football complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54901:
ATP-bound human mitochondrial Hsp60-Hsp10 double-ring complex (D7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54902:
ADP-bound human mitochondrial Hsp60 single ring complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54903:
ATP-bound human mitochondrial Hsp60 single-ring complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-55203:
Subtomogram average of the 39S mitochondrial ribosome from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55204:
Subtomogram average of the 55S mitochondrial ribosome from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55205:
Subtomogram average of the mtHsp60 singlering complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55206:
Subtomogram average of the mtHsp60:mtHsp10 half-football complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55207:
Subtomogram average of the mtHsp60:mtHsp10 Football complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-54486:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor (unbudded region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54487:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor(bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54489:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54497:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-49043:
Hemagglutinin CA09 homotrimer bound to AEL31302/AEL31311 Fab
Method: single particle / : Fernandez-Quintero ML, Turner HL

EMDB-49044:
Hemagglutinin CA09 homotrimer bound to AMB38310/AMB38599 Fab
Method: single particle / : Fernandez-Quintero ML, Raghavan SSR, Gharpure A, Turner HL, Ward AB

PDB-9n5y:
Hemagglutinin CA09 homotrimer bound to AEL31302/AEL31311 Fab
Method: single particle / : Fernandez-Quintero ML, Turner HL

PDB-9n5z:
Hemagglutinin CA09 homotrimer bound to AMB38310/AMB38599 Fab
Method: single particle / : Fernandez-Quintero ML, Raghavan SSR, Gharpure A, Turner HL, Ward AB

EMDB-72652:
Cereblon-DDB1 with Golcadomide
Method: single particle / : Watson ER, Lander GC

EMDB-72653:
Cereblon with Golcadomide and Ikaros ZF1-2-3
Method: single particle / : Watson ER, Lander GC

EMDB-52247:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-52258:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-52259:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-9hl9:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more