[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,553 items for (author: fan & r)

EMDB-51031:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51032:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51033:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51038:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-42118:
Toxoplasma gondii apical end with ICMAP1 conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-42119:
Toxoplasma gondii apical end with ICMAP2 conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-42120:
Toxoplasma gondii apical end with ICMAP3i conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-42121:
Toxoplasma gondii apical end with ICMAP3ii conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-19822:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+bromosterol (DOPC, DOPE, DOPS, bromo-ergosterol, PI(4,5)P2 35:20:20:15:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-42400:
RORC mRNA 3'UTR riboswitch A97G/G98A mutant class C
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42401:
RORC mRNA 3'UTR riboswitch 77-GA mutant class A
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42403:
RORC mRNA 3'UTR riboswitch 117-AC mutant class C
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42404:
RORC mRNA 3'UTR riboswitch 117-AC mutant class B
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-39646:
the complex structure of the H4B6 Fab with the RBD of Omicron BA.5 S protein
Method: single particle / : Xia LY, Zhang YY, Zhou Q, Yan RH

EMDB-18307:
Native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Loewith RJ, Defosses A

EMDB-18308:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture -PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol 30:20:20:30)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18309:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/-sterol (DOPC, DOPE, DOPS, PI(4,5)P2 50:20:20:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18310:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18311:
Compact state - Native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18312:
Stretched state - Native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qb7:
Pil1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Loewith RJ, Defosses A

PDB-8qb8:
Lsp1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Loewith RJ, Defosses A

PDB-8qb9:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture -PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol 30:20:20:30)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbb:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/-sterol (DOPC, DOPE, DOPS, PI(4,5)P2 50:20:20:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbd:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbe:
Compact state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbf:
Compact state - Pil1 dimer with lipid headgroups fitted in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbg:
Stretched state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18779:
Structure of the non-mitochondrial citrate synthase from Ananas comosus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8qzp:
Structure of the non-mitochondrial citrate synthase from Ananas comosus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-38873:
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

EMDB-38874:
Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

EMDB-38875:
Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

EMDB-38876:
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

PDB-8y36:
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

PDB-8y37:
Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

PDB-8y38:
Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

PDB-8y39:
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.
Method: single particle / : Li Y, Lu G, Li J, Pei X, Lin J

EMDB-37467:
SARS-CoV-2 Omicron BQ.1.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37468:
SARS-CoV-2 Omicron BQ.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37469:
SARS-CoV-2 Omicron XBB RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37470:
SARS-CoV-2 Omicron BF.7 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37471:
SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304
Method: single particle / : Li W, Xie Y

PDB-8wdy:
SARS-CoV-2 Omicron BQ.1.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8wdz:
SARS-CoV-2 Omicron BQ.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8we0:
SARS-CoV-2 Omicron XBB RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8we1:
SARS-CoV-2 Omicron BF.7 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8we4:
SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304
Method: single particle / : Li W, Xie Y

EMDB-18689:
Maps of Collagen VI half- and full-beads
Method: single particle / : Schulte T, Speranzini V, Chaves-Sanjuan A, Ricagno S

EMDB-45583:
The Structure of Spiroplasma Virus 4
Method: single particle / : Mietzsch M, McKenna R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more