[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 55 items for (author: espinos & r)

EMDB-17576:
SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

EMDB-17578:
SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

PDB-8p99:
SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

PDB-8p9y:
SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

EMDB-26363:
Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM459
Method: single particle / : Kirk NS, Lawrence MC

EMDB-26364:
Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM462
Method: single particle / : Kirk NS, Lawrence MC

PDB-7u6d:
Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM459
Method: single particle / : Kirk NS, Lawrence MC

PDB-7u6e:
Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM462
Method: single particle / : Kirk NS, Lawrence MC

EMDB-26459:
cryo-EM structure of the rigor state wild type myosin-15-F-actin complex (symmetry expansion and re-centering)
Method: single particle / : Gong R, Reynolds MJ, Alushin GM

EMDB-26460:
cryo-EM structure of the ADP state wild type myosin-15-F-actin complex (symmetry expansion and re-centering)
Method: single particle / : Gong R, Reynolds MJ, Alushin GM

EMDB-26461:
cryo-EM structure of the ADP state wild type myosin-15-F-actin complex (symmetry expansion)
Method: single particle / : Gong R, Reynolds MJ, Alushin GM

EMDB-26462:
cryo-EM structure of the rigor state wild type myosin-15-F-actin complex (symmetry expansion)
Method: single particle / : Gong R, Reynolds MJ, Alushin GM

EMDB-26463:
cryo-EM structure of the ADP state actin filament (symmetry expansion)
Method: single particle / : Gong R, Reynolds MJ, Alushin GM

EMDB-26464:
Cryo-EM structure of the rigor state Jordan myosin-15-F-actin complex (symmetry expansion)
Method: single particle / : Gong R, Reynolds MJ

PDB-7udt:
cryo-EM structure of the rigor state wild type myosin-15-F-actin complex (symmetry expansion and re-centering)
Method: single particle / : Gong R, Reynolds MJ, Alushin GM

PDB-7udu:
cryo-EM structure of the ADP state wild type myosin-15-F-actin complex (symmetry expansion and re-centering)
Method: single particle / : Gong R, Reynolds MJ, Alushin GM

EMDB-24321:
Cryo-EM structure of the ADP state actin filament
Method: helical / : Gong R, Espinosa de los Reyes S, Reynolds MJ, Gurel P, Alushin GM

EMDB-24322:
cryo-EM structure of the rigor state wild type myosin-15-F-actin complex
Method: helical / : Gong R, Reynolds MJ, Gurel P, Alushin GM

EMDB-24399:
cryo-EM structure of the ADP state wild type myosin-15-F-actin complex
Method: helical / : Gong R, Reynolds MJ, Gurel P, Alushin GM

EMDB-24400:
Cryo-EM structure of the rigor state Jordan myosin-15-F-actin complex
Method: helical / : Gong R, Reynolds MJ, Gurel P, Alushin GM

PDB-7r8v:
Cryo-EM structure of the ADP state actin filament
Method: helical / : Gong R, Espinosa de los Reyes S, Reynolds MJ, Gurel P, Alushin GM

PDB-7r91:
cryo-EM structure of the rigor state wild type myosin-15-F-actin complex
Method: helical / : Gong R, Reynolds MJ, Gurel P, Alushin GM

PDB-7rb8:
cryo-EM structure of the ADP state wild type myosin-15-F-actin complex
Method: helical / : Gong R, Reynolds MJ, Gurel P, Alushin GM

PDB-7rb9:
Cryo-EM structure of the rigor state Jordan myosin-15-F-actin complex
Method: helical / : Gong R, Reynolds MJ, Gurel P, Alushin GM

EMDB-20843:
Alpha-E-catenin ABD-F-actin complex
Method: helical / : Mei L, Alushin GM

EMDB-20844:
Metavinculin ABD-F-actin complex
Method: helical / : Mei L, Alushin GM

PDB-6upv:
Alpha-E-catenin ABD-F-actin complex
Method: helical / : Mei L, Alushin GM

PDB-6upw:
Metavinculin ABD-F-actin complex
Method: helical / : Mei L, Alushin GM

EMDB-11115:
Human Picobirnavirus CP VLP
Method: single particle / : Ortega-Esteban A, Mata CP

EMDB-11116:
Human Picobirnavirus Ht-CP VLP
Method: single particle / : Ortega-Esteban A, Mata CP

PDB-6z8d:
Human Picobirnavirus CP VLP
Method: single particle / : Ortega-Esteban A, Mata CP, Rodriguez-Espinosa MJ, Luque D, Irigoyen N, Rodriguez JM, de Pablo PJ, Caston JR

PDB-6z8e:
Human Picobirnavirus Ht-CP VLP
Method: single particle / : Ortega-Esteban A, Mata CP, Rodriguez-Espinosa MJ, Luque D, Irigoyen N, Rodriguez JM, de Pablo PJ, Caston JR

EMDB-11117:
Human Picobirnavirus D45-CP VLP
Method: single particle / : Ortega-Esteban A, Mata CP

PDB-6z8f:
Human Picobirnavirus D45-CP VLP
Method: single particle / : Ortega-Esteban A, Mata CP, Rodriguez-Espinosa MJ, Luque D, Irigoyen N, Rodriguez JM, de Pablo PJ, Caston JR

EMDB-10284:
Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

PDB-6spf:
Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

EMDB-10280:
Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

EMDB-10281:
Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

EMDB-10282:
Pseudomonas aeruginosa 50s ribosome from a clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

EMDB-10283:
Pseudomonas aeruginosa 30s ribosome from a clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

EMDB-10285:
Pseudomonas aeruginosa 70s ribosome from a clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

PDB-6spb:
Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

PDB-6spc:
Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

PDB-6spd:
Pseudomonas aeruginosa 50s ribosome from a clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

PDB-6spe:
Pseudomonas aeruginosa 30s ribosome from a clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

PDB-6spg:
Pseudomonas aeruginosa 70s ribosome from a clinical isolate
Method: single particle / : Halfon Y, Jimenez-Fernande A, La Ros R, Espinos R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A

EMDB-0360:
Saccharomyces cerevisiae spliceosomal E complex (UBC4)
Method: single particle / : Liu S, Li X

EMDB-0361:
Saccharomyces cerevisiae spliceosomal E complex (ACT1)
Method: single particle / : Liu S, Li X

PDB-6n7p:
S. cerevisiae spliceosomal E complex (UBC4)
Method: single particle / : Liu S, Li X, Zhou ZH, Zhao R

PDB-6n7r:
Saccharomyces cerevisiae spliceosomal E complex (ACT1)
Method: single particle / : Liu S, Li X, Zhou ZH, Zhao R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more