[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,313 items for (author: du & w)

EMDB-66696:
Human KCNQ2-CaM in complex with QO-58 and PIP2
Method: single particle / : Zhao YW, Yang ZN, Guo JT, Du XN

EMDB-66788:
Human KCNQ2-CaM in complex with QO-83 and PIP2
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

PDB-9xb9:
Human KCNQ2-CaM in complex with QO-58 and PIP2
Method: single particle / : Zhao YW, Yang ZN, Guo JT, Du XN

PDB-9xed:
Human KCNQ2-CaM in complex with QO-83 and PIP2
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

EMDB-54547:
Cerebellar GluA1/4 NTD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s3q:
Cerebellar GluA1/4 NTD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-52611:
Human TRPM4 ion channel in MAASTY copolymer lipid nanodisc in a calcium-bound state
Method: single particle / : Pugh CF, Feilen LP, Zivkovic D, Praestegaard KF, Sideris C, Borthwick NJ, De Lichtenberg C, Bolla JR, Autzen AAA, Autzen HE

PDB-9i3r:
Human TRPM4 ion channel in MAASTY copolymer lipid nanodisc in a calcium-bound state
Method: single particle / : Pugh CF, Feilen LP, Zivkovic D, Praestegaard KF, Sideris C, Borthwick NJ, De Lichtenberg C, Bolla JR, Autzen AAA, Autzen HE

EMDB-60948:
In situ cryo-electron tomogram of 4days WT cytoplasm 2
Method: electron tomography / : Qu L, Tang X

EMDB-60949:
In situ cryo-electron tomogram of 4days WT cytoplasm 1
Method: electron tomography / : Qu L, Tang X

EMDB-60950:
In situ cryo-electron tomogram of 4days WT nucleus (PSG at NE)
Method: electron tomography / : Qu L, Tang X

EMDB-60951:
In situ cryo-electron tomogram of 4days WT nucleus (trimer close to NE)
Method: electron tomography / : Qu L, Tang X

EMDB-60952:
In situ cryo-electron tomogram of 4days rpn13null nucleus
Method: electron tomography / : Qu L, Tang X

EMDB-60953:
In situ cryo-electron tomogram of 1day WT nucleus
Method: electron tomography / : Qu L, Tang X

EMDB-60954:
In situ cryo-electron tomogram of 4days rpn2deltaN nucleus
Method: electron tomography / : Qu L, Tang X

EMDB-60955:
In situ cryo-electron tomogram of 4days rpn9deltaN nucleus
Method: electron tomography / : Qu L, Tang X

EMDB-60956:
In situ cryo-electron tomogram of 18h nucleus
Method: electron tomography / : Qu L, Tang X

EMDB-60957:
In situ cryo-electron tomogram of 4days WT cell
Method: electron tomography / : Qu L, Tang X

EMDB-60960:
26S proteasome trimer
Method: subtomogram averaging / : Qu L, Tang X

EMDB-60961:
26S proteasome trimer close to nuclear envelope
Method: subtomogram averaging / : Qu L, Tang X

EMDB-64273:
Cryo-EM structure of VTC complex(Vtc5/Vtc4/Vtc3/Vtc1)
Method: single particle / : Zhang J, Du Z, Liu Z

PDB-9umg:
Cryo-EM structure of VTC complex(Vtc5/Vtc4/Vtc3/Vtc1)
Method: single particle / : Zhang J, Du Z, Liu Z

EMDB-62892:
Human KCNQ2-CaM in complex with QO-58
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

PDB-9l8w:
Human KCNQ2-CaM in complex with QO-58
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9ti4:
High resolution Cryo-EM structure of human complex I in mitochondria
Method: single particle / : Nguyen MD, Singh V, Rorbach J

EMDB-56149:
L. pneumophila 3-methylcrotonyl-CoA carboxylase A1B6
Method: single particle / : Meir A, Durie C, Somarathne R, Shrestha R, Zehra M, Brodeur C, Bhella D, Lai WC

PDB-9tqg:
L. pneumophila 3-methylcrotonyl-CoA carboxylase A1B6
Method: single particle / : Meir A, Durie C, Somarathne R, Shrestha R, Zehra M, Brodeur C, Bhella D, Lai WC

EMDB-53901:
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53902:
Semliki Forest virus trimer 1 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53903:
Semliki Forest virus trimer 2 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53904:
Composite density map of Semliki Forest virus in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53905:
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53906:
Semliki Forest virus trimer 1 in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53907:
Semliki Forest virus trimer 2 in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53908:
Composite density map of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

PDB-9rbq:
Semliki Forest virus trimer 1 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

PDB-9rbr:
Semliki Forest virus trimer 2 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-55905:
Cryo-EM structure of Z-DNA binding antibody Z-D11 in complex with left-handed Z-DNA
Method: single particle / : Chin DHR, Luo YB, Luo D

EMDB-55906:
Cryo-EM structure of Z22 mAb in complex with left-handed Z-DNA (dimer of trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

EMDB-55912:
Cryo-EM structure of Z22 antibody in complex with left-handed Z-DNA (trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

PDB-9tgn:
Cryo-EM structure of Z-DNA binding antibody Z-D11 in complex with left-handed Z-DNA
Method: single particle / : Chin DHR, Luo YB, Luo D

PDB-9tgo:
Cryo-EM structure of Z22 mAb in complex with left-handed Z-DNA (dimer of trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

PDB-9tgw:
Cryo-EM structure of Z22 antibody in complex with left-handed Z-DNA (trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more