[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,027 items for (author: deng & x)

EMDB-66412:
mouse PDCD5-TRiC-ADP complex
Method: single particle / : Song QQ, Cong Y

EMDB-61145:
Complex structure of influenza hemagglutinin HA stem with CR9114 Fab and FISW84 Fab
Method: single particle / : Ru YX, Liu DJ, Deng L, Li YW

PDB-9j5l:
Complex structure of influenza hemagglutinin HA stem with CR9114 Fab and FISW84 Fab
Method: single particle / : Ru YX, Liu DJ, Deng L, Li YW

EMDB-64556:
Cryo-EM structure of human V1aR bound with balovaptan at a resolution of 3.0 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-64559:
Cryo-EM structure of human V1aR bound with SRX246 at a resolution of 2.6 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-66695:
Cryo-EM structure of human V1aR in apo state at a resolution of 2.8 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

PDB-9uwj:
Cryo-EM structure of human V1aR bound with balovaptan at a resolution of 3.0 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

PDB-9uwl:
Cryo-EM structure of human V1aR bound with SRX246 at a resolution of 2.6 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

PDB-9xb1:
Cryo-EM structure of human V1aR in apo state at a resolution of 2.8 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-64555:
Cryo-EM structure of human V1aR bound with atosiban at a resolution of 2.8 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

PDB-9uwi:
Cryo-EM structure of human V1aR bound with atosiban at a resolution of 2.8 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-65858:
Closed state of A8 gpJ 713 central tail fiber
Method: single particle / : Deng TY, Ge XF, Wang JW

EMDB-65859:
Open state of A8 gpJ 713 central tail fiber with OmpC G17 from E. coli EDL933
Method: single particle / : Deng TY, Ge XF, Wang JW

PDB-9wca:
Closed state of A8 gpJ 713 central tail fiber
Method: single particle / : Deng TY, Ge XF, Wang JW

PDB-9wcb:
Open state of A8 gpJ 713 central tail fiber with OmpC G17 from E. coli EDL933
Method: single particle / : Deng TY, Ge XF, Wang JW

EMDB-67630:
Cryo-EM map of SARS-CoV-2 spike complexed with Fab 12C2
Method: single particle / : Deng Z, Zhao H, Yu F

EMDB-63192:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63193:
Psilocin-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63194:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63195:
Ariadne-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63196:
DOI-NBOMe-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

PDB-9ll7:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

PDB-9ll8:
Psilocin-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

PDB-9ll9:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

PDB-9lla:
Ariadne-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

PDB-9llb:
DOI-NBOMe-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63884:
The 1:1 cryo-EM structure of BAP1/ASXL1-K351Ub in complex with H2AK119Ub nucleosome
Method: single particle / : Ai HS, Liu L

EMDB-62509:
cryo-EM structure of RNF20/RNF40-RAD6A-Ub in complex with H2BS112GlcNAc nucleosome
Method: single particle / : Deng ZH, Ai HS, Liu L

PDB-9kqo:
cryo-EM structure of RNF20/RNF40-RAD6A-Ub in complex with H2BS112GlcNAc nucleosome
Method: single particle / : Deng ZH, Ai HS, Liu L

EMDB-63452:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

EMDB-61420:
The complex structure of Y510-9709 and NET determined with Cryo-EM
Method: single particle / : Jia Y, Gao B, Tan J, Yan C, Zhang W, Lan Y, Xiao Y, Huang Y, Jin Y, Yuan Y, Tian J, Ma W, Zhang Y

EMDB-61426:
The complex structure of 0086-0043 and NET determined with Cryo-EM.
Method: single particle / : Jia YJ, Gao B, Tan JX, Yan CY, Zhang W, Lan YY

PDB-9jel:
The complex structure of Y510-9709 and NET determined with Cryo-EM
Method: single particle / : Jia Y, Gao B, Tan J, Yan C, Zhang W, Lan Y

PDB-9jf3:
The complex structure of 0086-0043 and NET determined with Cryo-EM.
Method: single particle / : Jia YJ, Gao B, Tan JX, Yan CY, Zhang W, Lan YY

EMDB-64489:
influx carrier substrate bound form
Method: single particle / : Chen H, Jiang D

EMDB-64490:
influx carrier apo form
Method: single particle / : Chen H, Jiang D

PDB-9utd:
influx carrier substrate bound form
Method: single particle / : Chen H, Jiang D

PDB-9ute:
influx carrier apo form
Method: single particle / : Chen H, Jiang D

EMDB-64501:
Structure of Fks1 in complex with YMR295C
Method: single particle / : Li JL, Zhu AQ, Wang X, Yan CY, Deng D

EMDB-64502:
Structure of dimeric FKS1 in complex with tRNA
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

PDB-9utu:
Structure of Fks1 in complex with YMR295C
Method: single particle / : Li JL, Zhu AQ, Wang X, Yan CY, Deng D

PDB-9utw:
Structure of dimeric FKS1 in complex with tRNA
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

EMDB-64376:
Plant-TaNNS
Method: single particle / : Wang L, Zhao J, Yin C, Chi C, Hou S

PDB-9uob:
Plant-TaNNS
Method: single particle / : Wang L, Zhao J, Yin C, Chi C, Hou S

EMDB-66120:
Cryo-EM structure of Candida glabrata GPI mannosyltransferase I bound to Dol-P-Man
Method: single particle / : Sun H, Wu WH, Yan ZF

PDB-9wno:
Cryo-EM structure of Candida glabrata GPI mannosyltransferase I bound to Dol-P-Man
Method: single particle / : Sun H, Wu WH, Yan ZF

EMDB-63395:
Cryo-EM structure of the Nipah G head domain in complex with three Fabs
Method: single particle / : Wang Y, Deng Z, Zhao H

PDB-9lue:
Cryo-EM structure of the Nipah G head domain in complex with three Fabs
Method: single particle / : Wang Y, Deng Z, Zhao H

EMDB-62510:
Cryo-EM map of RNF20/RNF40-RAD6A-Ub in complex with H2BS112GlcNAc nucleosome (4.58 angstrom)
Method: single particle / : Deng ZH, Ai HS, Liu L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more