[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,593 items for (author: dai & y)

EMDB-63737:
The structure of THIK1 complexed with halothane
Method: single particle / : Dai Z, Yin YX

PDB-9m9q:
The structure of THIK1 complexed with halothane
Method: single particle / : Dai Z, Yin YX

EMDB-63734:
Structure of human THIK1-apo
Method: single particle / : Dai Z, Yin YX

PDB-9m9m:
Structure of human THIK1-apo
Method: single particle / : Dai Z, Yin YX

EMDB-63742:
The structure of THIK1-R92S
Method: single particle / : Dai Z, Yin YX

PDB-9m9w:
The structure of THIK1-R92S
Method: single particle / : Dai Z, Yin YX

EMDB-63743:
The structure of THIK1 complexed with AA
Method: single particle / : Dai Z, Yin YX

PDB-9m9x:
The structure of THIK1 complexed with AA
Method: single particle / : Dai Z, Yin YX

EMDB-53847:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

PDB-9r90:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

EMDB-74344:
Human sterile alpha motif domain-containing protein 9 (SAMD9), loss-of-function mutant R837A
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

PDB-9zjw:
Human sterile alpha motif domain-containing protein 9 (SAMD9), loss-of-function mutant R837A
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

EMDB-74342:
Human sterile alpha motif domain-containing protein 9 (SAMD9), symmetric dimer
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

PDB-9zju:
Human sterile alpha motif domain-containing protein 9 (SAMD9), symmetric dimer
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

EMDB-74343:
Human sterile alpha motif domain-containing protein 9 (SAMD9), asymmetric dimer "wing" shape
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

PDB-9zjv:
Human sterile alpha motif domain-containing protein 9 (SAMD9), asymmetric dimer "wing" shape
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

EMDB-74347:
Human sterile alpha motif domain-containing protein 9 (SAMD9), loss-of-function mutant R685Q/G686C/I968C
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

PDB-9zjz:
Human sterile alpha motif domain-containing protein 9 (SAMD9), loss-of-function mutant R685Q/G686C/I968C
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

EMDB-74339:
Human sterile alpha motif domain-containing protein 9 (SAMD9), monomer
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

PDB-9zjr:
Human sterile alpha motif domain-containing protein 9 (SAMD9), monomer
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

EMDB-74340:
Human sterile alpha motif domain-containing protein 9 (SAMD9), asymmetric dimer "shell" shape
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

PDB-9zjs:
Human sterile alpha motif domain-containing protein 9 (SAMD9), asymmetric dimer "shell" shape
Method: single particle / : Mou Z, Zhang F, Dai X, Xiang Y

EMDB-63270:
Structure of human PADI6-UHRF1-UBE2D3 complex
Method: single particle / : Li J, Deng D

PDB-9lpk:
Structure of human PADI6-UHRF1-UBE2D3 complex
Method: single particle / : Li J, Deng D

EMDB-63246:
Cryo-EM structure of SFTSV Gn in complex with ZS004-1C5
Method: single particle / : Bi JH, Zhang YY, Zhou Q, Li DP

EMDB-63247:
Cryo-EM structure of SFTSV Gn in complex with ZS01S-336
Method: single particle / : Bi JH, Zhang YY, Zhou Q, Li DP

EMDB-63248:
Cryo-EM structure of SFTSV Gn in complex with ZS01S-65
Method: single particle / : Bi JH, Zhang YY, Zhou Q, Li DP

EMDB-39009:
positive allosteric modulator(BMS986187)-bound delta-opioid receptor-Gi complex
Method: single particle / : Luo P, Xu Y, Wang Y, Zhuang Y, Xu HE

PDB-8y71:
positive allosteric modulator(BMS986187)-bound delta-opioid receptor-Gi complex
Method: single particle / : Luo P, Xu Y, Wang Y, Zhuang Y, Xu HE

EMDB-65801:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1.5 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65802:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65803:
Immune complex of P5-1C8 Fab binding the RBD of Omicron JN.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65804:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (2 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65805:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (1 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65806:
Immune complex of P5-1C8 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65807:
Immune complex of P5-1C8 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65808:
Immune complex of P5-1C8 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65070:
cryoEM structure of retron-Eco7 complex (form II)
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

PDB-9vhl:
cryoEM structure of retron-Eco7 complex (form II)
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-62849:
Gi-bound kappa opioid receptor in complex with dynorphin and positive allosteric modulator MPAM-15
Method: single particle / : Zhuang Y, Wang Y, Xu Y, Luo P, Xu HE

PDB-9l60:
Gi-bound kappa opioid receptor in complex with dynorphin and positive allosteric modulator MPAM-15
Method: single particle / : Zhuang Y, Wang Y, Xu Y, Luo P, Xu HE

EMDB-65211:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
Method: helical / : Li YS, Li DN, Dai B

EMDB-65213:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
Method: helical / : Li YS, Li DN, Dai B

EMDB-65214:
Cryo-EM structure of hnRAC1-2,8homobeta fibril
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnk:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnm:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnn:
Cryo-EM structure of hnRAC1-2,8homobeta fibril
Method: helical / : Li YS, Li DN, Dai B

EMDB-65064:
cryoEM structure of retron-Eco7 complex
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

PDB-9vhe:
cryoEM structure of retron-Eco7 complex
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-62779:
Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 2
Method: helical / : Zhang YL, Dai B

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more