[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 661 items for (author: chong & l)

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-54374:
CryoEM structure of transcribing RNA polymerase II elongation complex in post-catalysis state
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

PDB-9ryb:
CryoEM structure of transcribing RNA polymerase II elongation complex in post-catalysis state
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-74842:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H70
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-74844:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H51
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-74865:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H77
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-74873:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H33
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-74879:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H83
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-71745:
Composite map of hypomethylated 80S ribosome treated with hygromycin B
Method: single particle / : Zhao Y, Li H

PDB-9pn5:
Composite map of hypomethylated 80S ribosome treated with hygromycin B
Method: single particle / : Zhao Y, Li H

EMDB-47093:
Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B
Method: single particle / : Zhao Y, Li H

EMDB-47098:
Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B, Class II
Method: single particle / : Zhao Y, Li H

PDB-9dov:
Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B
Method: single particle / : Zhao Y, Li H

PDB-9dp7:
Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B, Class II
Method: single particle / : Zhao Y, Li H

EMDB-53056:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB4/7
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53057:
CryoEM structure of transcribing RNA polymerase II elongation complex_Composite map
Method: single particle / : Li Q, Yi Q, Zhang P, Wang D

EMDB-53060:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB9
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53062:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of Jaw/RPB9
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53063:
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB12/Wall
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-53064:
CryoEM structure of transcribing RNA polymerase II elongation complex_3D classification map containing the complete nucleic acid scaffold
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-64741:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2v:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-67523:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

PDB-21ao:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

EMDB-64578:
local ARP-NCP structure of the ncBAF-nucleosome complex in the apo state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

EMDB-64579:
The apo density map of BCL7B-containing ARP module of the human SWI/SNF complex
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

EMDB-64580:
The ADP-bound density map of BCL7B-containing ARP module of the human SWI/SNF complex
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

PDB-9uxa:
local ARP-NCP structure of the ncBAF-nucleosome complex in the apo state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

PDB-9uxb:
The apo structure of BCL7B-containing ARP module of the human SWI/SNF complex
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

PDB-9uxc:
The ADP-bound structure of BCL7B-containing ARP module of the human SWI/SNF complex
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

EMDB-67524:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

EMDB-67539:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

EMDB-67541:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

PDB-21aq:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

PDB-21au:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

PDB-21av:
Epitope and functional classification of human neutralizing antibodies against SFTSV Gn
Method: single particle / : Wang QR, Jian FC, Wang YX

EMDB-63691:
At S3 trimer
Method: single particle / : Zhang SS

EMDB-63692:
At S1+2S3 trimer
Method: single particle / : Zhang SS

EMDB-63695:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7r:
At S3 trimer
Method: single particle / : Zhang SS

PDB-9m7s:
At S1+2S3 trimer
Method: single particle / : Zhang SS

PDB-9m7w:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

EMDB-64577:
local ATPase-NCP density map of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

PDB-9ux9:
local ATPase-NCP structure of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

EMDB-63693:
At S1+tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7u:
At S1+tRNA trimer
Method: single particle / : Zhang SS

EMDB-67108:
Cryo-EM structure of Receptor of GPR75
Method: single particle / : Wu C, Yuan Q

EMDB-67109:
The cryo_EM structure of GPR75 complex
Method: single particle / : Wu C, Yuan Q

EMDB-67110:
A composite Cryo-EM structure of GPR75
Method: single particle / : Yuan Q, Wu C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more