[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 11,589 items for (author: chi & c)

EMDB-48304:
Cryo-EM structure of human NBCn2
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

EMDB-48318:
Cryo-EM structure of human NBCn2 bound to Carbonate
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

EMDB-48320:
Cryo-EM structure of human NBCn2 bound to Compound 38J
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

EMDB-65608:
SARS-CoV-2 ancestral spike S-2P
Method: single particle / : Sugita Y, Hirose N, Hemmi T, Yajima H, Hashiguchi T

EMDB-80383:
Polyrod without P-ring formed by FlgG (G65V) from the Salmonella TH26292 strain
Method: single particle / : Yamaguchi T, Kato T, Minamino T, Namba K

EMDB-55067:
CRYO-EM CONSENSUS MAP OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-55068:
CRYO-EM FOCUSED REFINEMENT MAP OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-72277:
Cryo-EM map of Plasmodium falciparum 20S proteasome bound to an asparagine-ethylenediamine based inhibitor TDI6245
Method: single particle / : Hsu HC, Li H

EMDB-54409:
Human Acyl-CoA dehydrogenase family member 9 (ACAD9)
Method: single particle / : Giachin G, Grinzato A, Buratto C, Battistutta R, Forneris F, Glatt S

EMDB-65779:
ATTRv-V30M type I filament from gastrocnemius muscle biopsy of an individual with a V30M mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65780:
ATTRv-V30M type II filament from gastrocnemius muscle biopsy of an individual with a V30M mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65781:
ATTRv-V30M type III filament from gastrocnemius muscle biopsy of an individual with a V30M mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65782:
ATTRv-F64S type I filament from vitreous body of an individual with a F64S mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65783:
ATTRv-F64S type II filament from vitreous body of an individual with a F64S mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65784:
ATTRv-F64S type III filament from vitreous body of an individual with a F64S mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65785:
ATTRv-F64S type IV filament from vitreous body of an individual with a F64S mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65786:
ATTRv-A97S type I filament from gastrocnemius muscle biopsy of an individual with a A97S mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65787:
ATTRv-A97S type II filament from gastrocnemius muscle biopsy of an individual with a A97S mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65788:
ATTRv-A97S type III filament from gastrocnemius muscle biopsy of an individual with a A97S mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65789:
ATTRv-E61K filament from gastrocnemius muscle biopsy of an individual with a E61K mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65790:
ATTRv-T59K filament from gastrocnemius muscle biopsy of an individual with a T59K mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65791:
ATTRv-G83R type II filament from gastrocnemius muscle biopsy of an individual with a G83R mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65792:
ATTRv-G83R type I filament from gastrocnemius muscle biopsy of an individual with a G83R mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65793:
ATTRv-G83R type II filament from gastrocnemius muscle biopsy of an individual with a G83R mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65794:
ATTRv-V30A type I filament from gastrocnemius muscle biopsy of an individual with a V30A mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65795:
ATTRv-V30A type II filament from gastrocnemius muscle biopsy of an individual with a V30A mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65796:
ATTRv-K35N filament from gastrocnemius muscle biopsy of an individual with a K35N mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-65797:
ATTRv-F33V filament from gastrocnemius muscle biopsy of an individual with a F33V mutation.
Method: helical / : Zheng Y, Liang J, Liu Y, Shi Y

EMDB-56543:
Lid-engaged Complex: BAM bound BepA with lid engaged in membrane
Method: single particle / : Fenn KL, Ranson NA

EMDB-56549:
Poised Complex: BAM bound BepA
Method: single particle / : Fenn KL, Ranson NA

EMDB-56550:
Encounter Complex: BAM bound BepA
Method: single particle / : Fenn KL, Ranson NA

EMDB-56559:
Poised Complex: BAM bound BepA
Method: single particle / : Fenn KL, Ranson NA

PDB-28jl:
Lid-engaged Complex: BAM bound BepA with lid engaged in membrane
Method: single particle / : Fenn KL, Ranson NA

PDB-28jq:
Poised Complex: BAM bound BepA
Method: single particle / : Fenn KL, Ranson NA

PDB-28jr:
Encounter Complex: BAM bound BepA
Method: single particle / : Fenn KL, Ranson NA

PDB-28ju:
Poised Complex: BAM bound BepA
Method: single particle / : Fenn KL, Ranson NA

EMDB-71555:
Cryo-EM structure of full-length human TRPV1 in complex with analgesic MSP20
Method: single particle / : Neuberger A, Talyzina IA, Romeo I, Aiello F, Maramai S, Alcaro S, Artese A, Brizzi A, Sobolevsky AI

PDB-9pea:
Cryo-EM structure of full-length human TRPV1 in complex with analgesic MSP20
Method: single particle / : Neuberger A, Talyzina IA, Romeo I, Aiello F, Maramai S, Alcaro S, Artese A, Brizzi A, Sobolevsky AI

EMDB-74550:
Autoinhibited P-Rex2 Composite Map
Method: single particle / : Anderson LK, Cash JN

PDB-9zq7:
Autoinhibited P-Rex2
Method: single particle / : Anderson LK, Cash JN

EMDB-77085:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77086:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77087:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77088:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-65342:
SARS-CoV-2 BA.5 spike S-6PSS one-RBD-up state
Method: single particle / : Hemmi T, Yajima H, Hashiguchi T

EMDB-65325:
SARS-CoV-2 Ancestral strain spike S-6PSS closed state
Method: single particle / : Hemmi T, Yajima H, Hashiguchi T

EMDB-65324:
SARS-CoV-2 Ancestral strain spike S-6P
Method: single particle / : Hemmi T, Yajima H, Hashiguchi T

EMDB-65331:
SARS-CoV-2 BA.5 spike S-2P closed state
Method: single particle / : Hemmi T, Yajima H, Hashiguchi T

EMDB-65334:
SARS-CoV-2 BA.5 spike S-6P one-RBD-up state
Method: single particle / : Hemmi T, Yajima H, Hashiguchi T

EMDB-65332:
SARS-CoV-2 BA.5 spike S-2P one-RBD-up state
Method: single particle / : Hemmi T, Yajima H, Hashiguchi T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more