[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 11,107 items for (author: chen & b)

EMDB-71158:
Structure of human cardiac sodium channel Nav1.5 in intermediate open state
Method: single particle / : Biswas R, Chinthalapudi K

PDB-9p24:
Structure of human cardiac sodium channel Nav1.5 in intermediate open state
Method: single particle / : Biswas R, Chinthalapudi K

EMDB-67195:
E.coli delta lepA 30S ribosomal subunit class A
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67196:
E.coli delta lepA 30S ribosomal subunit class B
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67197:
E.coli delta lepA 30S ribosomal subunit class C
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67198:
E.coli delta lepA 30S ribosomal subunit class A, head domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67199:
E.coli delta lepA 30S ribosomal subunit class B, head domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67200:
E.coli delta lepA 30S ribosomal subunit class C, head domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67201:
E.coli delta lepA 30S ribosomal subunit class C, body domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67202:
E.coli delta lepA 30S ribosomal subunit class B, body domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-67203:
E.coli delta lepA 30S ribosomal subunit class A, body domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

PDB-9xtc:
E.coli delta lepA 30S ribosomal subunit class C, body domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

PDB-9xtd:
E.coli delta lepA 30S ribosomal subunit class B, body domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

PDB-9xte:
E.coli delta lepA 30S ribosomal subunit class A, body domain
Method: single particle / : Kravchenko OV, Maksimova EM, Baymukhametov TN, Stolboushkina EA

EMDB-64791:
CryoEM structure of human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

PDB-9v5p:
Human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

EMDB-64082:
Cryo-EM structure of human TRPV3 in complex with sevoflurane determined in MSP2N2 nanodisc
Method: single particle / : Lu X, Yao J

EMDB-53274:
Hcp3-Tce1 complex from the Pseudomonas aeruginosa Type VI Secretion System
Method: single particle / : Paracuellos P, Bexter A, Patkowski JB, Omelchenko O, Mace K, Ilangovan A, Filloux A, Costa TRD

PDB-9qpe:
Hcp3-Tce1 complex from the Pseudomonas aeruginosa Type VI Secretion System
Method: single particle / : Paracuellos P, Bexter A, Patkowski JB, Omelchenko O, Mace K, Ilangovan A, Filloux A, Costa TRD

EMDB-75897:
Evaluating the Volta Phase Plate for Improved Tomogram Alignment in Cryo-Electron Tomography: structure of 80S ribosome with VPP (full dataset)
Method: subtomogram averaging / : Hutchings J, Ji D, Ali M, Siems H, Serwas D, Paraan M, Montabana EA, Yu Y

EMDB-75900:
Evaluating the Volta Phase Plate for Improved Tomogram Alignment in Cryo-Electron Tomography: structure of 70S ribosome with VPP (full dataset)
Method: subtomogram averaging / : Hutchings J, Ji D, Ali M, Paraan M, Montabana EA, Yu Y

EMDB-70771:
Cryo-EM structure of rat TRPM1 in the apo state
Method: single particle / : Fabrizio M, Zhao C

PDB-9or5:
Cryo-EM structure of rat TRPM1 in the apo state
Method: single particle / : Fabrizio M, Zhao C

EMDB-64823:
PSI-LHCE supercomplex from Euglena gracilis
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-64824:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

PDB-9v7t:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

PDB-9v7u:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-65106:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

EMDB-65107:
Raw consensus map of Type II-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65108:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65109:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vj8:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

PDB-9vj9:
Type I-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vja:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vjb:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-63691:
At S3 trimer
Method: single particle / : Zhang SS

EMDB-63692:
At S1+2S3 trimer
Method: single particle / : Zhang SS

EMDB-63695:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7r:
At S3 trimer
Method: single particle / : Zhang SS

PDB-9m7s:
At S1+2S3 trimer
Method: single particle / : Zhang SS

PDB-9m7w:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

EMDB-69812:
Cryo-ET STA of immature HERV-K Gag
Method: subtomogram averaging / : Zhu Y, Zhong L, Wu J, Boyce M, Krebs SA, Chen L, Stuart ID, Wang P, Ni T, Zhang P

EMDB-69815:
Cryo-ET STA of immature HERV-K Gag collected with Cc corrector and 20eV energy filter slit width
Method: subtomogram averaging / : Zhu Y, Zhong L, Wu J, Boyce M, Krebs SA, Chen L, Stuart ID, Wang P, Ni T, Zhang P

EMDB-69817:
Cryo-ET STA of immature HERV-K Gag with the Cc corrector and 60 eV energy filter slit width
Method: subtomogram averaging / : Zhu Y, Zhong L, Wu J, Boyce M, Krebs SA, Chen L, Stuart ID, Wang P, Ni T, Zhang P

EMDB-69829:
CryoEM SPA of Rotavirus triple layer particles collected with Cc corrector and energy filter slit width of 20 eV
Method: single particle / : Zhu Y, Zhong L, Wu J, Boyce M, Krebs SA, Chen L, Stuart ID, Wang P, Ni T, Zhang P

EMDB-69831:
CryoEM SPA of Rotavirus triple layer particles collected with Cc corrector and energy filter slit width of 60 eV
Method: single particle / : Zhu Y, Zhong L, Wu J, Boyce M, Krebs SA, Chen L, Stuart ID, Wang P, Ni T, Zhang P

EMDB-69859:
CryoEM SPA of Rotavirus triple layer particles collected with Cc corrector and without an energy filter slit
Method: single particle / : Zhu Y, Zhong L, Wu J, Boyce M, Krebs SA, Chen L, Stuart ID, Wang P, Ni T, Zhang P

EMDB-68133:
GDP human alpha1A/beta3 S239C microtubule
Method: single particle / : Ti SC, Luo JY, Khoo CJ

EMDB-68134:
GDP human alpha1A/beta3 microtubule
Method: single particle / : Ti SC, Luo JY, Khoo CJ

EMDB-65885:
GMPCPP-stabilizsd human alpha1A/beta3 microtubule
Method: single particle / : Ti SC, Luo JY, Khoo CJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more