[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 32 items for (author: charro & d)

EMDB-52419:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Open Tetramer
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52420:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Closed1 tetramer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52421:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Closed2 tetramer
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52422:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Empty monomer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52423:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. cofactor-monomer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52424:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Cofactor/ligand-monomer
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52425:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. cofactor/ligand-monomer in Open tetramer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52426:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. cofactor/ligand-monomer in Closed1 tetramer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52427:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. cofactor/ligand-monomer in Closed2 tetramer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52428:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Total-monomer
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-52429:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Closed2 tetramer with cofactor/ligand-monomer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

PDB-9hux:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Open Tetramer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

PDB-9huy:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Closed1 tetramer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

PDB-9huz:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Closed2 tetramer
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

PDB-9hv0:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Empty monomer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

PDB-9hv4:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. cofactor-monomer.
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

PDB-9hv5:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Cofactor/ligand-monomer
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

PDB-9hv6:
CryoEM map of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis obtained in the presence of NAD+ and L-glutamate. Total-monomer
Method: single particle / : Lazaro M, Chamorro N, Lopez-Alonso JP, Charro D, Rasia RM, Jimenez-Oses G, Valle M, Lisa MN

EMDB-14621:
Map_spike_protein_SARSCoV2
Method: single particle / : Abrescia NGA, Stagnoli AS, Connell SR, Jimenez-Oses G

EMDB-10325:
cryo-EM map of ASFV MCP p72 homotrimers purified from virion
Method: single particle / : Abrescia NG, Andres G, Charro D

EMDB-10346:
Structure of African Swine fever virus
Method: single particle / : Abrescia NG, Andres G, Charro D, Matamoros T, Dillard R

EMDB-0172:
Cryo-EM structure of the archaeal extremophilic internal membrane containing Haloarcula hispanica icosahedral virus 2 (HHIV-2) at 3.78 Angstroms resolution.
Method: single particle / : Abrescia NG, Santos-Perez I

PDB-6h82:
Cryo-EM structure of the archaeal extremophilic internal membrane containing Haloarcula hispanica icosahedral virus 2 (HHIV-2) at 3.78 Angstroms resolution.
Method: single particle / : Abrescia NG, Santos-Perez I, Charro D

EMDB-0050:
DNA-devoid HCIV-1 virus particle
Method: single particle / : Santos-Perez I, Charro D, Gil-Carton D, Azkargorta M, Elortza F, Bamford DH, Oksanen HM, Abrescia NGA

EMDB-0072:
Localized reconstructed spike HCIV-1
Method: single particle / : Santos-Perez I, Charro D, Gil-Carton D, Azkargorta M, Elortza F, Bamford DH, Oksanen HM, Abrescia NGA

EMDB-0073:
Localized reconstructed spike HCIV-1
Method: single particle / : Santos-Perez I, Charro D, Gil-Carton D, Azkargorta M, Elortza F, Bamford DH, Oksanen HM, Abrescia NGA

EMDB-0131:
HHIV-2 pentameric vertex complex
Method: single particle / : Santos-Perez I, Charro D, Gil-Carton D, Azkagorta M, Elortza F, Bamford DH, Oksanen HM, Abrescia NGA

EMDB-0174:
Cryo-EM structure of archaeal extremophilic internal membrane-containing Haloarcula californiae icosahedral virus 1 (HCIV-1) at 3.74 Angstroms resolution.
Method: single particle / : Abrescia NG, Santos-Perez I, Charro D, Azkargorta M, Elortza F, Bamford DH, Oksanen HM, Abrescia NGA

PDB-6h9c:
Cryo-EM structure of archaeal extremophilic internal membrane-containing Haloarcula californiae icosahedral virus 1 (HCIV-1) at 3.74 Angstroms resolution.
Method: single particle / : Abrescia NG, Santos-Perez I, Charro D

EMDB-3109:
Insight into the assembly of viruses with vertical single beta-barrel major capsid proteins
Method: single particle / : Gil-Carton D, Jaakkola ST, Charro D, Peralta B, Castano-Diez D, Oksanen HM, Bamford DH, Abrescia NG

EMDB-3110:
Insight into the assembly of viruses with vertical single beta-barrel major capsid proteins
Method: subtomogram averaging / : Gil-Carton D, Jaakkola ST, Charro D, Peralta B, Castano-Diez D, Oksanen HM, Bamford DH, Abrescia NG

EMDB-3111:
Insight into the assembly of viruses with vertical single beta-barrel major capsid proteins
Method: subtomogram averaging / : Gil-Carton D, Jaakkola ST, Charro D, Peralta B, Castano-Diez D, Oksanen HM, Bamford DH, Abrescia NG

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more