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Showing all 32 items for (author: brackmann & b)

EMDB-54030: 
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54056: 
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 1
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54077: 
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2
Method: single particle / : Domjan D, Weiss J, Cavadini S, Veccia L, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54078: 
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 2
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54154: 
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2 (Focused refinement of nucleosome and ATPase lobes)
Method: single particle / : Domjan D, Weiss J, Cavadini S, Vecchia L, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54155: 
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2 (Consensus map)
Method: single particle / : Domjan D, Weiss J, Cavadini S, Vecchia L, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54156: 
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2 (Focused refinement of BAF)
Method: single particle / : Domjan D, Weiss J, Cavadini S, Vecchia L, Kempf G, Kater L, Pathare GR, Thoma NH

PDB-9rl4: 
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

PDB-9rmc: 
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 1
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

PDB-9rn1: 
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2
Method: single particle / : Domjan D, Weiss J, Cavadini S, Veccia L, Kempf G, Kater L, Pathare G, Thoma NH

PDB-9rn2: 
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 2
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-15777: 
Cryo-EM structure of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome
Method: single particle / : Bacic L, Gaullier G, Deindl S

PDB-8b0a: 
Cryo-EM structure of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome
Method: single particle / : Bacic L, Gaullier G, Deindl S

EMDB-17944: 
Cryo-EM structure of an asymmetric nucleosome (10-N-0) from a Glacios/Falcon3EC
Method: single particle / : Gaullier G

EMDB-13065: 
Cryo-EM structure of ALC1/CHD1L bound to a PARylated nucleosome
Method: single particle / : Bacic L, Gaullier G

EMDB-13070: 
cryoDRGN graph traversal of the ALC1 - PARylated nucleosome complex particle distribution
Method: single particle / : Bacic L, Gaullier G, Deindl S

PDB-7otq: 
Cryo-EM structure of ALC1/CHD1L bound to a PARylated nucleosome
Method: single particle / : Bacic L, Gaullier G, Deindl S

EMDB-11220: 
Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: nucleosome class.
Method: single particle / : Bacic L, Gaullier G, Deindl S

EMDB-11221: 
Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: hexasome class.
Method: single particle / : Bacic L, Gaullier G, Deindl S

PDB-6zhx: 
Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: nucleosome class.
Method: single particle / : Bacic L, Gaullier G, Croll TI, Deindl S

PDB-6zhy: 
Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: hexasome class.
Method: single particle / : Bacic L, Gaullier G, Deindl S

EMDB-3878: 
The distal end of a non-contractile T6SS sheath.
Method: single particle / : Nazarov S, Basler M

EMDB-3879: 
The baseplate of a non-contractile T6SS sheath.
Method: single particle / : Nazarov S, Basler M

PDB-5ojq: 
The modeled structure of of wild type extended type VI secretion system sheath/tube complex in vibrio cholerae based on cryo-EM reconstruction of the non-contractile sheath/tube complex
Method: helical / : Wang J, Brackmann M, Castano-Diez D, Kudryashev M, Goldie K, Maier T, Stahlberg H, Basler M

EMDB-3563: 
Subtomogram average of type VI secretion system (T6SS) extended sheath
Method: subtomogram averaging / : Wang J, Castano-Diez D, Kudryashev M, Basler M

EMDB-3564: 
Subtomogram average of type VI secretion system (T6SS) contracted sheath
Method: subtomogram averaging / : Wang J, Basler M

EMDB-3566: 
VipA-N3, non-contractile sheath of the type VI secretion system
Method: helical / : Wang J, Brackmann M, Castano-Diez D, Kudryashev M, Goldie G, Maier T, Stahlberg H, Basler M

EMDB-3567: 
VipA-N2/VipB contracted sheath of type VI secretion system
Method: helical / : Wang J, Brackmann M, Castano-Diez D, Kudryashev M, Goldie K, Maier T, Stahlberg H, Basler M

PDB-5mxn: 
Atomic model of the VipA/VipB/Hcp, the type six secretion system non-contractile sheath-tube of Vibrio cholerae from cryo-EM
Method: helical / : Wang J, Brackmann M, Castano-Diez D, Kudryashev M, Goldie K, Maier T, Stahlberg H, Basler M

PDB-5myu: 
VipA-N2/VipB contracted sheath of type VI secretion system
Method: helical / : Wang J, Brackmann B, Castano-Diez D, Kudryashev M, Goldie D, Maier T, Stahlberg H, Basler M

PDB-3j9g: 
Atomic model of the VipA/VipB, the type six secretion system contractile sheath of Vibrio cholerae from cryo-EM
Method: helical / : Kudryashev M, Wang RY-R, Brackmann M, Scherer S, Maier T, Baker D, DiMaio F, Stahlberg H, Egelman EH, Basler M

EMDB-2699: 
VipA/VipB, contractile sheath of the type VI secretion system
Method: helical / : Kudryashev M, Wang R, Brackmann M, Scherer S, Maier T, DiMaio F, Baker D, Stahlberg H, Egelman EH, Basler M
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