[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 34 items for (author: bornholdt & za)

EMDB-23488:
Hendra virus receptor binding protein in complex with HENV-103 and HENV-117 Fabs
Method: single particle / : Binshtein E, Crowe JE

EMDB-22884:
Structure of the NiV F glycoprotein in complex with the 12B2 neutralizing antibody
Method: single particle / : Dang HV, Veesler D

EMDB-22885:
Structure of the HeV F glycoprotein in complex with the 1F5 neutralizing antibody
Method: single particle / : Dang HV, Veesler D

PDB-7ki4:
Structure of the NiV F glycoprotein in complex with the 12B2 neutralizing antibody
Method: single particle / : Dang HV, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-7ki6:
Structure of the HeV F glycoprotein in complex with the 1F5 neutralizing antibody
Method: single particle / : Dang HV, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-11660:
Structure of VP40 matrix layer in EBOV NP-VP24-VP35-VP40 VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11661:
Structure of VP40 matrix layer in EBOV VP40 VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11662:
Structure of VP40 matrix layer in EBOV VP40-GP VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11663:
Structure of VP40 matrix layer in intact MARV virions
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11664:
Structure of VP40 matrix layer in MARV VP40 VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11665:
Structure of GP in EBOV VP40-GP VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-8935:
Ebola virus Makona variant GP (mucin-deleted) in complex with pan-ebolavirus human antibody ADI-15878 Fab
Method: single particle / : Murin CD, Ward AB

EMDB-8936:
Bundibugyo virus GP (mucin-deleted) in complex with pan-ebolavirus human antibody ADI-15878 Fab
Method: single particle / : Murin CD, Ward AB

PDB-6dzl:
Ebola virus Makona variant GP (mucin-deleted) in complex with pan-ebolavirus human antibody ADI-15878 Fab
Method: single particle / : Murin CD, Ward AB

PDB-6dzm:
Bundibugyo virus GP (mucin-deleted) in complex with pan-ebolavirus human antibody ADI-15878 Fab
Method: single particle / : Murin CD, Ward AB

EMDB-8698:
EBOV GPdMuc:ADI-16061
Method: single particle / : Murin CD, Ward AB, Turner HL

EMDB-8699:
EBOV GPdMuc in complex with ADI-15742 Fab
Method: single particle / : Murin CD, Ward AB, Turner HL

EMDB-8700:
EBOV GPdMuc:ADI-15878
Method: single particle / : Murin CD, Ward AB, Turner HL

EMDB-8701:
EBOV GPdMuc:ADI-15946
Method: single particle / : Murin CD, Ward AB, Turner HL

EMDB-6586:
Negative stain EM of Ebola virus GP bound to human survivor antibodies
Method: single particle / : Borndoldt ZA, Turner HL, Murin CD, Li W, Sok D, Sounders C, Piper AE, Fusco ML, Pommert K, Klempner M, Reimann KA, Golf A, Wittrup DK, Gerngross TU, Krauland E, Glass PJ, Burton DR, Saphire EO, Ward AB, Walker LM

EMDB-6587:
Negative stain EM of Ebola virus GP bound to human survivor antibodies
Method: single particle / : Borndoldt ZA, Turner HL, Murin CD, Li W, Sok D, Sounders C, Piper AE, Fusco ML, Pommert K, Klempner M, Reimann KA, Golf A, Wittrup DK, Gerngross TU, Krauland E, Glass PJ, Burton DR, Saphire EO, Ward AB, Walker LM

EMDB-6588:
Negative stain EM of Ebola virus GP bound to human survivor antibodies
Method: single particle / : Borndoldt ZA, Turner HL, Murin CD, Li W, Sok D, Sounders C, Piper AE, Fusco ML, Pommert K, Klempner M, Reimann KA, Golf A, Wittrup DK, Gerngross TU, Krauland E, Glass PJ, Burton DR, Saphire EO, Ward AB, Walker LM

EMDB-6589:
Negative stain EM of Ebola virus GP bound to human survivor antibodies
Method: single particle / : Borndoldt ZA, Turner HL, Murin CD, Li W, Sok D, Sounders C, Piper AE, Fusco ML, Pommert K, Klempner M, Reimann KA, Golf A, Wittrup DK, Gerngross TU, Krauland E, Glass PJ, Burton DR, Saphire EO, Ward AB, Walker LM

EMDB-6232:
Negative stain single particle electron microscopy of Marburg Virus Glycoproteins bound to antibodies from a human survivor
Method: single particle / : Flyak A, Ilinykh PA, Murin CD, Garron T, Shen X, Fusco ML, Hashiguchi T, Bornholdt ZA, Slaughter C, Sapparapu G, Ksiazek TG, Ward AB, Saphire EO, Bukreyev A, Crowe JE

EMDB-6233:
Negative stain single particle electron microscopy of Marburg Virus Glycoproteins bound to antibodies from a human survivor
Method: single particle / : Flyak A, Ilinykh PA, Murin CD, Garron T, Shen X, Fusco ML, Hashiguchi T, Bornholdt ZA, Slaughter C, Sapparapu G, Ksiazek TG, Ward AB, Saphire EO, Bukreyev A, Crowe JE

EMDB-6234:
Negative stain single particle electron microscopy of Marburg Virus Glycoproteins bound to antibodies from a human survivor
Method: single particle / : Flyak A, Ilinykh PA, Murin CD, Garron T, Shen X, Fusco ML, Hashiguchi T, Bornholdt ZA, Slaughter C, Sapparapu G, Ksiazek TG, Ward AB, Saphire EO, Bukreyev A, Crowe JE

EMDB-6235:
Negative stain single particle electron microscopy of Marburg Virus Glycoproteins bound to antibodies from a human survivor
Method: single particle / : Flyak A, Ilinykh PA, Murin CD, Garron T, Shen X, Fusco ML, Hashiguchi T, Bornholdt ZA, Slaughter C, Sapparapu G, Ksiazek TG, Ward AB, Saphire EO, Bukreyev A, Crowe JE

EMDB-6236:
Negative stain single particle electron microscopy of Marburg Virus Glycoproteins bound to antibodies from a human survivor
Method: single particle / : Flyak A, Ilinykh PA, Murin CD, Garron T, Shen X, Fusco ML, Hashiguchi T, Bornholdt ZA, Slaughter C, Sapparapu G, Ksiazek TG, Ward AB, Saphire EO, Bukreyev A, Crowe JE

EMDB-6237:
Negative stain single particle electron microscopy of Marburg Virus Glycoproteins bound to antibodies from a human survivor
Method: single particle / : Flyak A, Ilinykh PA, Murin CD, Garron T, Shen X, Fusco ML, Hashiguchi T, Bornholdt ZA, Slaughter C, Sapparapu G, Ksiazek TG, Ward AB, Saphire EO, Bukreyev A, Crowe JE

EMDB-6238:
Negative stain single particle electron microscopy of Marburg Virus Glycoproteins bound to antibodies from a human survivor
Method: single particle / : Flyak A, Ilinykh PA, Murin CD, Garron T, Shen X, Fusco ML, Hashiguchi T, Bornholdt ZA, Slaughter C, Sapparapu G, Ksiazek TG, Ward AB, Saphire EO, Bukreyev A, Crowe JE

EMDB-6150:
Structures of Protective Antibodies Reveal Sites of Vulnerability on Ebola Virus
Method: single particle / : Murin CD, Fusco ML, Bornholdt ZA, Qiu X, Olinger GG, Zeitlin L, Kobinger GP, Ward AB, Saphire EO

EMDB-6151:
Structures of Protective Antibodies Reveal Sites of Vulnerability on Ebola Virus
Method: single particle / : Murin CD, Fusco ML, Bornholdt ZA, Qiu X, Olinger GG, Zeitlin L, Kobinger GP, Ward AB, Saphire EO

EMDB-6152:
Structures of Protective Antibodies Reveal Sites of Vulnerability on Ebola Virus
Method: single particle / : Murin CD, Fusco ML, Bornholdt ZA, Qiu X, Olinger GG, Zeitlin L, Kobinger GP, Ward AB, Saphire EO

EMDB-6153:
Structures of Protective Antibodies Reveal Sites of Vulnerability on Ebola Virus
Method: single particle / : Murin CD, Fusco ML, Bornholdt ZA, Qiu X, Olinger GG, Zeitlin L, Kobinger GP, Ward AB, Saphire EO

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more